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Report for CCDS32236.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32236.1 Public Homo sapiens 15 GALK2 24 110 108 CCDS HistoryNCBI Gene:2585Re-query CCDS DB by CCDS ID:32236.1Re-query CCDS DB by GeneID:2585See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32236.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327171.7 ENSP00000316632.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000327171.7Link to Ensembl Protein Viewer:ENSP00000316632.3Re-query CCDS DB by Nucleotide ID:ENST00000327171Re-query CCDS DB by Protein ID:ENSP00000316632
Original member Current member NCBI NM_001001556.3 NP_001001556.1 Accepted alive Link to Nucleotide Sequence:NM_001001556.3Link to Protein Sequence:NP_001001556.1Re-query CCDS DB by Nucleotide ID:NM_001001556Re-query CCDS DB by Protein ID:NP_001001556Link to BLAST:NP_001001556.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001556.1 447 Q01415-2 447 100% 0 0

Chromosomal Locations for CCDS 32236.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 49155997 49156016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49201162 49201250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49217190 49217313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49235851 49235941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49239221 49239367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49281987 49282085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49283566 49283718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49292327 49292537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49319604 49319805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 49327952 49328159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1344 nt):
ATGCCCGTCCTATATGACAGGTTACTGAAGCTAAAGGAGATGTTTAACTCCAAGTTTGGATCTATTCCCA
AGTTTTATGTTCGAGCACCAGGAAGAGTCAACATAATAGGAGAGCATATAGATTATTGTGGATATTCTGT
TCTTCCTATGGCTGTAGAACAAGATGTGCTAATAGCTGTAGAACCTGTGAAAACGTACGCTCTCCAACTG
GCCAATACAAATCCCTTGTATCCGGACTTCAGTACTAGTGCTAATAACATCCAGATTGATAAAACCAAGC
CTTTGTGGCACAACTATTTCTTATGTGGACTTAAAGGAATTCAGGAACACTTTGGTCTTAGTAACCTGAC
TGGAATGAACTGCCTGGTAGATGGAAATATCCCACCAAGTTCTGGCCTCTCCAGCTCCAGTGCTTTGGTC
TGTTGTGCTGGCTTGGTGACGCTCACAGTGCTGGGAAGGAATCTATCCAAGGTGGAACTTGCAGAAATCT
GTGCCAAGAGTGAGCGTTACATTGGCACTGAAGGAGGAGGCATGGACCAGTCTATATCATTTCTTGCAGA
AGAAGGAACTGCCAAGTTGATAGAATTTAGTCCTCTGAGGGCAACCGATGTAAAACTCCCAAGTGGAGCA
GTGTTTGTGATTGCCAACAGTTGTGTGGAGATGAATAAGGCAGCAACTTCCCATTTCAATATCAGGGTGA
TGGAGTGTCGGCTGGCTGCGAAGCTCCTGGCTAAATACAAAAGCTTGCAATGGGACAAAGTACTGAGGCT
GGAGGAGGTGCAGGCTAAACTAGGGATTAGTCTAGAAGAAATGCTGTTGGTCACAGAAGATGCCCTTCAT
CCTGAACCCTATAACCCTGAGGAGATCTGCAGGTGTCTGGGAATTAGCCTGGAGGAACTCCGAACCCAAA
TCCTGAGTCCAAACACTCAAGATGTGCTCATCTTCAAACTCTATCAGCGGGCAAAGCATGTGTACAGCGA
GGCTGCGCGAGTGCTCCAGTTTAAGAAGATATGTGAAGAAGCACCTGAAAACATGGTCCAGCTGCTGGGA
GAGTTGATGAACCAGAGCCACATGAGCTGCCGGGACATGTATGAGTGCAGCTGCCCCGAGCTGGATCAGC
TGGTGGACATCTGTCGGAAGTTTGGGGCTCAAGGGTCACGACTTACTGGAGCAGGATGGGGAGGCTGCAC
AGTATCAATGGTACCTGCGGACAAGCTGCCCAGCTTTCTAGCAAATGTGCACAAAGCTTATTACCAGAGG
AGTGATGGAAGCTTAGCACCGGAGAAGCAAAGTTTGTTTGCTACCAAACCTGGAGGTGGGGCTTTGGTTT
TGCTTGAGGCCTGA

Translation (447 aa):
MPVLYDRLLKLKEMFNSKFGSIPKFYVRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQL
ANTNPLYPDFSTSANNIQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALV
CCAGLVTLTVLGRNLSKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVKLPSGA
VFVIANSCVEMNKAATSHFNIRVMECRLAAKLLAKYKSLQWDKVLRLEEVQAKLGISLEEMLLVTEDALH
PEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVLQFKKICEEAPENMVQLLG
ELMNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTVSMVPADKLPSFLANVHKAYYQR
SDGSLAPEKQSLFATKPGGGALVLLEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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