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Report for CCDS33426.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33426.1 Public Homo sapiens 2 D2HGDH 24 110 108 CCDS HistoryNCBI Gene:728294Re-query CCDS DB by CCDS ID:33426.1Re-query CCDS DB by GeneID:728294See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33426.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321264.9 ENSP00000315351.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321264.9Link to Ensembl Protein Viewer:ENSP00000315351.4Re-query CCDS DB by Nucleotide ID:ENST00000321264Re-query CCDS DB by Protein ID:ENSP00000315351
Original member Current member NCBI NM_152783.5 NP_689996.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152783.5Link to Protein Sequence:NP_689996.4Re-query CCDS DB by Nucleotide ID:NM_152783Re-query CCDS DB by Protein ID:NP_689996Link to BLAST:NP_689996.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689996.4 521 Q8N465-1 521 100% 0 0

Chromosomal Locations for CCDS 33426.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 241735225 241735516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241741033 241741090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241742435 241742574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241743622 241743815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241744709 241744877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241750151 241750294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241751246 241751388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241755849 241756014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241767710 241767969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGCTGCCCCGTCGGCCTCTGGCGTGGCCCGCGTGGCTGTTGCGGGGTGCTCCGGGAGCCGCGGGTTCTT
GGGGTCGGCCGGTTGGCCCCCTGGCCCGCAGAGGCTGCTGCTCCGCCCCGGGGACCCCCGAGGTGCCGCT
GACCCGGGAGCGCTACCCCGTGCGGCGCTTGCCGTTCTCCACGGTGTCTAAGCAGGACCTGGCCGCCTTT
GAGCGCATCGTGCCCGGCGGGGTCGTCACGGACCCGGAAGCGCTGCAGGCTCCCAACGTGGACTGGTTGC
GGACGCTGCGAGGCTGTAGCAAGGTGCTGCTGAGGCCACGGACGTCGGAGGAGGTGTCCCACATCCTCAG
GCACTGCCACGAGAGGAACCTGGCCGTGAACCCACAGGGGGGCAACACAGGCATGGTGGGTGGCAGCGTC
CCCGTCTTTGACGAGATCATCCTCTCCACTGCCCGCATGAACCGGGTCCTCAGCTTCCACAGCGTGTCTG
GAATTCTGGTTTGCCAGGCGGGCTGCGTCCTGGAGGAGCTGAGCCGGTATGTGGAGGAACGGGACTTCAT
CATGCCGCTGGACTTAGGAGCCAAGGGCAGCTGCCACATCGGGGGAAACGTGGCAACCAACGCTGGAGGC
CTGCGGTTTCTTCGATATGGCTCACTGCATGGGACTGTCCTGGGCCTGGAAGTGGTGCTGGCCGACGGCA
CTGTCCTGGACTGCCTGACCTCCCTGAGGAAGGACAACACGGGCTATGACCTGAAGCAGCTGTTCATCGG
GTCGGAGGGCACTTTGGGGATCATCACCACGGTGTCCATCTTGTGTCCACCCAAGCCCAGGGCTGTGAAC
GTGGCTTTCCTCGGCTGCCCAGGCTTTGCTGAGGTTCTGCAGACCTTCAGCACCTGCAAGGGGATGCTGG
GTGAGATCCTGTCTGCATTCGAGTTCATGGATGCTGTGTGCATGCAGCTGGTCGGGCGCCATCTCCACCT
GGCCAGCCCGGTGCAAGAGAGTCCGTTTTACGTCCTCATCGAGACTTCAGGCTCCAACGCAGGCCATGAC
GCTGAGAAGCTGGGCCACTTCCTGGAGCACGCGCTGGGCTCCGGCCTGGTGACCGATGGGACCATGGCCA
CCGACCAGAGGAAAGTCAAGATGCTGTGGGCCCTGAGGGAAAGGATCACAGAGGCGCTGAGCCGGGATGG
CTACGTGTACAAGTACGACCTCTCCCTCCCTGTGGAGCGGCTCTACGACATCGTGACTGACCTGCGCGCC
CGCCTCGGCCCGCACGCCAAGCACGTGGTGGGCTATGGCCACCTTGGAGATGGTAACCTGCACCTCAATG
TGACGGCGGAGGCCTTCAGCCCCTCGCTCCTGGCTGCCCTGGAGCCCCACGTGTACGAGTGGACGGCCGG
GCAGCAGGGCAGCGTCAGCGCGGAGCACGGAGTGGGCTTCAGGAAGAGGGACGTCCTGGGCTACAGCAAG
CCACCGGGGGCCCTGCAGCTCATGCAGCAGCTCAAGGCCCTGCTGGACCCCAAGGGCATCCTCAACCCCT
ACAAGACGCTGCCCAGCCAGGCCTGA

Translation (521 aa):
MLPRRPLAWPAWLLRGAPGAAGSWGRPVGPLARRGCCSAPGTPEVPLTRERYPVRRLPFSTVSKQDLAAF
ERIVPGGVVTDPEALQAPNVDWLRTLRGCSKVLLRPRTSEEVSHILRHCHERNLAVNPQGGNTGMVGGSV
PVFDEIILSTARMNRVLSFHSVSGILVCQAGCVLEELSRYVEERDFIMPLDLGAKGSCHIGGNVATNAGG
LRFLRYGSLHGTVLGLEVVLADGTVLDCLTSLRKDNTGYDLKQLFIGSEGTLGIITTVSILCPPKPRAVN
VAFLGCPGFAEVLQTFSTCKGMLGEILSAFEFMDAVCMQLVGRHLHLASPVQESPFYVLIETSGSNAGHD
AEKLGHFLEHALGSGLVTDGTMATDQRKVKMLWALRERITEALSRDGYVYKYDLSLPVERLYDIVTDLRA
RLGPHAKHVVGYGHLGDGNLHLNVTAEAFSPSLLAALEPHVYEWTAGQQGSVSAEHGVGFRKRDVLGYSK
PPGALQLMQQLKALLDPKGILNPYKTLPSQA


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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