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Report for CCDS34609.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34609.1 Public Homo sapiens 7 KLHL7 24 110 108 CCDS HistoryNCBI Gene:55975Re-query CCDS DB by CCDS ID:34609.1Re-query CCDS DB by GeneID:55975See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34609.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339077.10 ENSP00000343273.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339077.10Link to Ensembl Protein Viewer:ENSP00000343273.4Re-query CCDS DB by Nucleotide ID:ENST00000339077Re-query CCDS DB by Protein ID:ENSP00000343273
Original member Current member NCBI NM_001031710.3 NP_001026880.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031710.3Link to Protein Sequence:NP_001026880.2Re-query CCDS DB by Nucleotide ID:NM_001031710Re-query CCDS DB by Protein ID:NP_001026880Link to BLAST:NP_001026880.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026880.2 586 Q8IXQ5-1 586 100% 0 0

Chromosomal Locations for CCDS 34609.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 23106027 23106146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23123777 23123879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23124688 23124781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23125048 23125172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23140769 23140944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23143851 23144025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23152067 23152209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23165698 23165938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23167836 23168037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23172948 23173045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23174015 23174298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1761 nt):
ATGGCAGCCTCTGGGGTGGAGAAGAGCAGCAAGAAGAAGACCGAGAAGAAACTTGCTGCTCGGGAAGAAG
CTAAATTGTTGGCGGGTTTCATGGGCGTCATGAATAACATGCGGAAACAGAAAACGTTGTGTGACGTGAT
CCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTGCAGCCAGTCATTTTTTTAAC
TTAATGTTCACAACTAACATGCTTGAATCAAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGATA
TTATTGAACAACTGGTGGAATTTGCTTATACTGCTAGAATTTCCGTGAATAGCAACAATGTTCAGTCTTT
GCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTTTGAAAGAACAA
GTTGATGCTTCAAATTGTCTTGGTATAAGTGTGCTAGCGGAGTGTCTAGATTGTCCTGAATTGAAAGCAA
CTGCAGATGACTTTATTCATCAGCACTTTACTGAAGTTTACAAAACTGATGAATTTCTTCAACTTGATGT
CAAGCGAGTAACACATCTTCTCAACCAGGACACTCTGACTGTGAGAGCAGAGGATCAGGTTTATGATGCT
GCAGTCAGGTGGTTGAAATACGATGAACCTAATCGCCAGCCATTTATGGTTGATATCCTTGCTAAAGTCA
GGTTTCCTCTTATATCAAAGAATTTCTTAAGTAAAACGGTACAAGCTGAACCACTTATTCAAGACAATCC
TGAATGCCTTAAGATGGTGATAAGTGGAATGAGGTACCATCTACTGTCTCCAGAGGACCGAGAAGAACTT
GTAGATGGCACAAGACCTAGAAGAAAGAAACATGACTACCGCATAGCCCTATTTGGAGGCTCTCAACCAC
AGTCTTGTAGATATTTTAACCCAAAGGATTATAGCTGGACAGACATCCGCTGCCCCTTTGAAAAACGAAG
AGATGCAGCATGCGTGTTTTGGGACAATGTAGTATACATTTTGGGAGGCTCTCAGCTTTTCCCAATAAAG
CGAATGGACTGCTATAATGTAGTGAAGGATAGCTGGTATTCGAAACTGGGTCCTCCGACACCTCGAGACA
GCCTTGCTGCATGTGCTGCAGAAGGCAAAATTTATACATCTGGAGGTTCAGAAGTAGGAAACTCAGCTCT
GTATTTATTTGAGTGCTATGATACGAGAACTGAAAGCTGGCACACAAAGCCCAGCATGCTGACCCAGCGC
TGCAGCCATGGGATGGTGGAAGCCAATGGCCTAATCTATGTTTGTGGTGGAAGTTTAGGAAACAATGTTT
CTGGGAGAGTGCTTAATTCCTGTGAAGTTTATGATCCTGCCACAGAAACATGGACTGAGCTGTGTCCAAT
GATTGAAGCCAGGAAGAATCATGGGCTGGTATTTGTAAAAGACAAGATATTTGCTGTGGGTGGTCAGAAT
GGTTTAGGTGGTCTGGACAATGTGGAATATTACGATATTAAGTTGAACGAATGGAAGATGGTCTCACCAA
TGCCATGGAAGGGTGTAACAGTGAAATGTGCAGCAGTTGGCTCTATAGTTTATGTCTTGGCTGGTTTTCA
GGGTGTTGGTCGATTAGGACACATTCTCGAATATAATACCGAAACAGACAAATGGGTTGCCAACTCCAAA
GTTCGTGCTTTTCCAGTCACAAGTTGTTTAATTTGTGTTGTCGATACTTGTGGAGCAAATGAAGAGACCC
TTGAAACATGA

Translation (586 aa):
MAASGVEKSSKKKTEKKLAAREEAKLLAGFMGVMNNMRKQKTLCDVILMVQERKIPAHRVVLAAASHFFN
LMFTTNMLESKSFEVELKDAEPDIIEQLVEFAYTARISVNSNNVQSLLDAANQYQIEPVKKMCVDFLKEQ
VDASNCLGISVLAECLDCPELKATADDFIHQHFTEVYKTDEFLQLDVKRVTHLLNQDTLTVRAEDQVYDA
AVRWLKYDEPNRQPFMVDILAKVRFPLISKNFLSKTVQAEPLIQDNPECLKMVISGMRYHLLSPEDREEL
VDGTRPRRKKHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIK
RMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR
CSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQN
GLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK
VRAFPVTSCLICVVDTCGANEETLET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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