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Report for CCDS34851.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34851.1 Public Homo sapiens 8 MTMR7 24 110 108 CCDS HistoryNCBI Gene:9108Re-query CCDS DB by CCDS ID:34851.1Re-query CCDS DB by GeneID:9108See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34851.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000180173.10 ENSP00000180173.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000180173.10Link to Ensembl Protein Viewer:ENSP00000180173.4Re-query CCDS DB by Nucleotide ID:ENST00000180173Re-query CCDS DB by Protein ID:ENSP00000180173
Original member Current member NCBI NM_004686.5 NP_004677.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004686.5Link to Protein Sequence:NP_004677.3Re-query CCDS DB by Nucleotide ID:NM_004686Re-query CCDS DB by Protein ID:NP_004677Link to BLAST:NP_004677.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004677.3 660 Q9Y216-1 660 100% 0 0

Chromosomal Locations for CCDS 34851.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 17299862 17300224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17302154 17302280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17304379 17304519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17305757 17305957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17309277 17309326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17311511 17311636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17313292 17313401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17331150 17331282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17341363 17341497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17348953 17349081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17361117 17361274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17371037 17371199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17373118 17373240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 17413269 17413292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1983 nt):
ATGGAGCACATCCGTACGCCCAAGGTTGAAAATGTCCGCTTGGTAGATCGAGTGTCTCCTAAAAAAGCAG
CTCTAGGTACTTTGTATTTGACGGCTACCCATGTCATATTCGTGGAAAATTCACCTGACCCAAGAAAAGA
AACATGGATTCTTCACAGTCAGATTTCCACCATTGAGAAACAGGCAACAACCGCTACCGGATGCCCTCTG
CTGATTCGCTGCAAGAACTTTCAGATAATACAGCTCATCATACCTCAGGAAAGAGATTGCCACGACGTGT
ACATCTCCCTGATACGCCTTGCAAGGCCAGTGAAATATGAGGAGTTATACTGCTTTTCATTCAACCCCAT
GCTGGATAAAGAAGAAAGAGAGCAAGGCTGGGTGCTGATCGATCTTAGTGAAGAATACACGCGGATGGGC
CTCCCTAATCATTACTGGCAGCTCAGCGATGTGAATAGAGACTACAGAGTCTGTGACTCTTATCCTACTG
AACTGTACGTTCCCAAATCGGCCACGGCACACATCATAGTGGGGAGTTCCAAATTCCGGAGTAGACGGCG
ATTTCCTGTCCTTTCTTACTATTATAAAGATAACCACGCCTCCATCTGCCGGAGCAGCCAGCCCCTGTCC
GGCTTCAGTGCCCGGTGCCTAGAGGACGAGCAGATGCTCCAGGCCATTAGGAAAGCCAATCCAGGAAGTG
ACTTCGTTTATGTCGTTGACACCCGGCCTAAACTTAATGCAATGGCAAATCGTGCTGCAGGGAAAGGCTA
TGAGAATGAAGACAATTATTCCAATATCAAGTTTCAGTTTATCGGGATAGAGAACATCCATGTCATGAGG
AACAGTCTGCAGAAAATGCTGGAAGTGTGTGAACTTAAATCTCCCTCCATGAGTGATTTCCTGTGGGGTC
TGGAGAACTCTGGCTGGTTAAGGCACATTAAAGCCATAATGGATGCAGGAATCTTCATTGCAAAGGCAGT
GTCAGAGGAAGGGGCAAGTGTGCTTGTTCACTGTTCTGATGGCTGGGACAGGACCGCTCAGGTGTGCTCG
GTGGCAAGCCTGCTGCTGGACCCTCACTACCGGACTCTGAAGGGCTTCATGGTATTAATTGAAAAGGACT
GGATTTCCTTTGGTCATAAGTTTAATCACCGATATGGCAATCTAGATGGTGACCCAAAAGAAATCTCTCC
AGTTATTGACCAGTTCATTGAGTGTGTTTGGCAGTTAATGGAACAATTTCCCTGTGCCTTTGAGTTCAAT
GAGAGGTTTTTGATTCACATTCAACATCACATTTATTCCTGCCAGTTTGGAAACTTCCTATGTAACAGCC
AAAAGGAGAGACGAGAACTCAAGATTCAAGAAAGAACATACTCATTATGGGCTCACCTGTGGAAGAATCG
GGCCGACTACCTGAATCCTCTGTTTAGAGCTGATCACAGCCAGACTCAGGGAACCCTTCATCTCCCTACA
ACACCATGTAACTTCATGTACAAGTTTTGGAGTGGAATGTATAACCGCTTTGAAAAGGGGATGCAGCCCC
GACAGTCAGTTACAGATTACCTAATGGCAGTGAAGGAAGAAACTCAGCAGCTAGAGGAAGAACTAGAGGC
CCTGGAAGAAAGGCTGGAAAAAATTCAAAAGGTCCAGTTAAATTGCACTAAGGTGAAGAGTAAGCAAAGT
GAGCCCAGCAAGCACTCAGGGTTTTCTACCTCAGACAACAGCATAGCCAACACTCCCCAGGATTACAGTG
GGAATATGAAATCATTTCCATCCCGGAGCCCTTCACAAGGCGATGAAGATTCTGCTCTGATTCTAACCCA
AGACAATCTGAAAAGTTCAGATCCAGATCTGTCAGCCAACAGTGACCAAGAGTCCGGGGTGGAGGATTTG
AGCTGTCGGTCTCCAAGTGGTGGTGAGCATGCACCGAGTGAAGATAGTGGCAAGGACCGGGATTCTGATG
AAGCCGTGTTTCTCACTGCCTGA

Translation (660 aa):
MEHIRTPKVENVRLVDRVSPKKAALGTLYLTATHVIFVENSPDPRKETWILHSQISTIEKQATTATGCPL
LIRCKNFQIIQLIIPQERDCHDVYISLIRLARPVKYEELYCFSFNPMLDKEEREQGWVLIDLSEEYTRMG
LPNHYWQLSDVNRDYRVCDSYPTELYVPKSATAHIIVGSSKFRSRRRFPVLSYYYKDNHASICRSSQPLS
GFSARCLEDEQMLQAIRKANPGSDFVYVVDTRPKLNAMANRAAGKGYENEDNYSNIKFQFIGIENIHVMR
NSLQKMLEVCELKSPSMSDFLWGLENSGWLRHIKAIMDAGIFIAKAVSEEGASVLVHCSDGWDRTAQVCS
VASLLLDPHYRTLKGFMVLIEKDWISFGHKFNHRYGNLDGDPKEISPVIDQFIECVWQLMEQFPCAFEFN
ERFLIHIQHHIYSCQFGNFLCNSQKERRELKIQERTYSLWAHLWKNRADYLNPLFRADHSQTQGTLHLPT
TPCNFMYKFWSGMYNRFEKGMQPRQSVTDYLMAVKEETQQLEEELEALEERLEKIQKVQLNCTKVKSKQS
EPSKHSGFSTSDNSIANTPQDYSGNMKSFPSRSPSQGDEDSALILTQDNLKSSDPDLSANSDQESGVEDL
SCRSPSGGEHAPSEDSGKDRDSDEAVFLTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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