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Report for CCDS34887.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34887.1 Public Homo sapiens 8 GOLGA7 24 110 108 CCDS HistoryNCBI Gene:51125Re-query CCDS DB by CCDS ID:34887.1Re-query CCDS DB by GeneID:51125See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34887.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357743.9 ENSP00000350378.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357743.9Link to Ensembl Protein Viewer:ENSP00000350378.4Re-query CCDS DB by Nucleotide ID:ENST00000357743Re-query CCDS DB by Protein ID:ENSP00000350378
Original member Current member EBI ENST00000518270.6 ENSP00000429329.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518270.6Link to Ensembl Protein Viewer:ENSP00000429329.1Re-query CCDS DB by Nucleotide ID:ENST00000518270Re-query CCDS DB by Protein ID:ENSP00000429329
Original member Current member EBI ENST00000687203.1 ENSP00000510742.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687203.1Link to Ensembl Protein Viewer:ENSP00000510742.1Re-query CCDS DB by Nucleotide ID:ENST00000687203Re-query CCDS DB by Protein ID:ENSP00000510742
Original member Current member EBI ENST00000694872.1 ENSP00000511557.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000694872.1Link to Ensembl Protein Viewer:ENSP00000511557.1Re-query CCDS DB by Nucleotide ID:ENST00000694872Re-query CCDS DB by Protein ID:ENSP00000511557
Original member Current member EBI ENST00000694873.1 ENSP00000511558.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000694873.1Link to Ensembl Protein Viewer:ENSP00000511558.1Re-query CCDS DB by Nucleotide ID:ENST00000694873Re-query CCDS DB by Protein ID:ENSP00000511558
Original member Current member EBI ENST00000694875.1 ENSP00000511560.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000694875.1Link to Ensembl Protein Viewer:ENSP00000511560.1Re-query CCDS DB by Nucleotide ID:ENST00000694875Re-query CCDS DB by Protein ID:ENSP00000511560
Original member Current member EBI ENST00000694884.1 ENSP00000511568.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000694884.1Link to Ensembl Protein Viewer:ENSP00000511568.1Re-query CCDS DB by Nucleotide ID:ENST00000694884Re-query CCDS DB by Protein ID:ENSP00000511568
Original member Current member EBI ENST00000694886.1 ENSP00000511569.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000694886.1Link to Ensembl Protein Viewer:ENSP00000511569.1Re-query CCDS DB by Nucleotide ID:ENST00000694886Re-query CCDS DB by Protein ID:ENSP00000511569
Original member Current member EBI ENST00000694887.1 ENSP00000511570.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000694887.1Link to Ensembl Protein Viewer:ENSP00000511570.1Re-query CCDS DB by Nucleotide ID:ENST00000694887Re-query CCDS DB by Protein ID:ENSP00000511570
Original member Current member EBI ENST00000694911.1 ENSP00000511586.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000694911.1Link to Ensembl Protein Viewer:ENSP00000511586.1Re-query CCDS DB by Nucleotide ID:ENST00000694911Re-query CCDS DB by Protein ID:ENSP00000511586
Original member Current member EBI ENST00000694916.1 ENSP00000511591.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000694916.1Link to Ensembl Protein Viewer:ENSP00000511591.1Re-query CCDS DB by Nucleotide ID:ENST00000694916Re-query CCDS DB by Protein ID:ENSP00000511591
Original member Current member NCBI NM_001002296.2 NP_001002296.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001002296.2Link to Protein Sequence:NP_001002296.1Re-query CCDS DB by Nucleotide ID:NM_001002296Re-query CCDS DB by Protein ID:NP_001002296Link to BLAST:NP_001002296.1
Original member Current member NCBI NM_001362979.1 NP_001349908.1 Accepted alive Link to Nucleotide Sequence:NM_001362979.1Link to Protein Sequence:NP_001349908.1Re-query CCDS DB by Nucleotide ID:NM_001362979Re-query CCDS DB by Protein ID:NP_001349908Link to BLAST:NP_001349908.1
Original member Current member NCBI NM_001362980.2 NP_001349909.1 Accepted alive Link to Nucleotide Sequence:NM_001362980.2Link to Protein Sequence:NP_001349909.1Re-query CCDS DB by Nucleotide ID:NM_001362980Re-query CCDS DB by Protein ID:NP_001349909Link to BLAST:NP_001349909.1
Original member Current member NCBI NM_016099.3 NP_057183.2 Accepted alive Link to Nucleotide Sequence:NM_016099.3Link to Protein Sequence:NP_057183.2Re-query CCDS DB by Nucleotide ID:NM_016099Re-query CCDS DB by Protein ID:NP_057183Link to BLAST:NP_057183.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002296.1 137 Q7Z5G4-1 137 100% 0 0
NP_001349908.1 137 Q7Z5G4-1 137 100% 0 0
NP_001349909.1 137 Q7Z5G4-1 137 100% 0 0
NP_057183.2 137 Q7Z5G4-1 137 100% 0 0

Chromosomal Locations for CCDS 34887.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 41490855 41490965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41497509 41497661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41505911 41506012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41507059 41507106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (414 nt):
ATGAGGCCGCAGCAGGCGCCGGTGTCCGGAAAGGTGTTCATTCAGCGAGACTACAGCAGTGGCACACGCT
GCCAGTTCCAGACCAAGTTCCCTGCGGAGCTGGAGAACCGGATTGATAGGCAGCAGTTTGAAGAAACAGT
TCGAACTCTAAATAACCTTTATGCAGAAGCAGAGAAGCTCGGCGGCCAGTCATATCTCGAAGGTTGTTTG
GCTTGTTTAACAGCATATACCATCTTCCTATGCATGGAAACTCATTATGAGAAGGTTCTGAAGAAAGTCT
CCAAATACATTCAAGAGCAGAATGAGAAGATCTATGCTCCACAAGGCCTCCTCCTGACAGACCCTATTGA
GCGAGGACTGCGAGTTATTGAAATTACCATTTATGAAGACAGAGGCATGAGCAGTGGAAGATAA

Translation (137 aa):
MRPQQAPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCL
ACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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