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Report for CCDS36256.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36256.1 Public Mus musculus 11 Ccl4 23 108 98 CCDS HistoryNCBI Gene:20303Re-query CCDS DB by CCDS ID:36256.1Re-query CCDS DB by GeneID:20303See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36256.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019074.3 ENSMUSP00000019074.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019074.3Link to Ensembl Protein Viewer:ENSMUSP00000019074.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000019074Re-query CCDS DB by Protein ID:ENSMUSP00000019074
Original member Current member NCBI NM_013652.2 NP_038680.1 Accepted alive Link to Nucleotide Sequence:NM_013652.2Link to Protein Sequence:NP_038680.1Re-query CCDS DB by Nucleotide ID:NM_013652Re-query CCDS DB by Protein ID:NP_038680Link to BLAST:NP_038680.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038680.1 92 P14097 92 100% 0 0

Chromosomal Locations for CCDS 36256.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 83662663 83662738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83663459 83663573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 83664294 83664381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (279 nt):
ATGAAGCTCTGCGTGTCTGCCCTCTCTCTCCTCTTGCTCGTGGCTGCCTTCTGTGCTCCAGGGTTCTCAG
CACCAATGGGCTCTGACCCTCCCACTTCCTGCTGTTTCTCTTACACCTCCCGGCAGCTTCACAGAAGCTT
TGTGATGGATTACTATGAGACCAGCAGTCTTTGCTCCAAGCCAGCTGTGGTATTCCTGACCAAAAGAGGC
AGACAGATCTGTGCTAACCCCAGTGAGCCCTGGGTCACTGAGTACATGAGTGACTTGGAGTTGAACTGA

Translation (92 aa):
MKLCVSALSLLLLVAAFCAPGFSAPMGSDPPTSCCFSYTSRQLHRSFVMDYYETSSLCSKPAVVFLTKRG
RQICANPSEPWVTEYMSDLELN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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