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Report for CCDS36461.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36461.1 Public Mus musculus 12 Rps29 23 108 98 CCDS HistoryNCBI Gene:20090Re-query CCDS DB by CCDS ID:36461.1Re-query CCDS DB by GeneID:20090See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36461.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037023.8 ENSMUSP00000038352.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037023.8Link to Ensembl Protein Viewer:ENSMUSP00000038352.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000037023Re-query CCDS DB by Protein ID:ENSMUSP00000038352
Original member NCBI NM_009093.2 NP_033119.1 Updated not alive Link to Nucleotide Sequence:NM_009093.2Link to Protein Sequence:NP_033119.1Re-query CCDS DB by Nucleotide ID:NM_009093Re-query CCDS DB by Protein ID:NP_033119
Current member NCBI NM_009093.3 NP_033119.1 Accepted alive Link to Nucleotide Sequence:NM_009093.3Link to Protein Sequence:NP_033119.1Re-query CCDS DB by Nucleotide ID:NM_009093Re-query CCDS DB by Protein ID:NP_033119Link to BLAST:NP_033119.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033119.1 56 P62274 56 100% 0 0

Chromosomal Locations for CCDS 36461.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 69157813 69157821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69158661 69158760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 69158997 69159058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (171 nt):
ATGGGTCACCAGCAGCTCTACTGGAGTCACCCACGGAAGTTCGGCCAGGGTTCCCGCTCTTGCCGCGTCT
GCTCCAACCGCCACGGTCTGATCCGCAAATACGGGCTGAACATGTGCCGCCAGTGCTTCCGGCAGTACGC
GAAGGACATAGGCTTCATTAAGTTGGACTAA

Translation (56 aa):
MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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