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Report for CCDS37080.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37080.1 Public Mus musculus 15 Fam91a1 23 108 98 CCDS HistoryNCBI Gene:210998Re-query CCDS DB by CCDS ID:37080.1Re-query CCDS DB by GeneID:210998See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37080.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037270.4 ENSMUSP00000036524.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037270.4Link to Ensembl Protein Viewer:ENSMUSP00000036524.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000037270Re-query CCDS DB by Protein ID:ENSMUSP00000036524
Original member NCBI NM_145959.3 NP_666071.2 Updated not alive Link to Nucleotide Sequence:NM_145959.3Link to Protein Sequence:NP_666071.2Re-query CCDS DB by Nucleotide ID:NM_145959Re-query CCDS DB by Protein ID:NP_666071
Current member NCBI NM_145959.4 NP_666071.2 Accepted alive Link to Nucleotide Sequence:NM_145959.4Link to Protein Sequence:NP_666071.2Re-query CCDS DB by Nucleotide ID:NM_145959Re-query CCDS DB by Protein ID:NP_666071Link to BLAST:NP_666071.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_666071.2 837 Q3UVG3 837 100% 0 0

Chromosomal Locations for CCDS 37080.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 58415706 58415777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58420199 58420283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58421746 58421897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58423321 58423378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58424197 58424264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58424777 58424890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58426594 58426684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58427054 58427116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58429992 58430098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58430179 58430217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58430662 58430774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58431206 58431321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58432515 58432627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58432894 58432980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58434664 58434796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58441578 58441726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58442832 58442966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58443161 58443274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58447586 58447658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58448343 58448492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58449931 58450035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58450538 58450661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58452983 58453052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 58454750 58454932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2514 nt):
ATGAACATCGACGTTGAGTTCCACATCCGGCACAATTATCCTTGGAGCAAGTTGCCAACGAACGTGAAGC
AGAGTCTTGGAAACTCACAGAGAGAATATGAAAAGCAGGTTGTTTTGTACAGTATTCGCAATCAGTTGCG
CTACAGAAATAACCTAGTTAAACATGTCAAGAAAGATGAACGCAAGTACTATGAGGAGCTGCTCAAGTAC
AGTCGTGACCATCTCATGCTGTACCCTTACCACTTATCCGACATCATGGTCAAGGGCCTGAGGATAACCC
CATTCTCATACTATGCTGGGATCATGGAGGACATCATGAACAGTGAGAAAAGTTACGATTCATTGCCTAA
TTTTACTGCTGCTGACTGTCTGCGACTTCTTGGCATAGGAAGGAACCAGTACATTGACCTGATGAATCAG
TGCAGATCTTCAAAAAAATTCTTCAGAAGGAAAACTGCCCGTGACCTTCTACCAATGAAGCCAGTGGAAA
TTGCCATCGAGGCGTGGTGGGTGGTGCAGGCTGGCTATATCACAGAAGATGACATCAAGATATGCACTTT
TCCTGAGAAAGGCGCCATTGATAAGATCATCGACTCAGGTCCTCAGCTCTCTGGGTCACTAGATTACAAT
GTCGTACACAGTTTGTATAACAAAGGCTTTATTTATCTGGATGTGCCCATATCAGATGACAGTTGTATAG
CTGTCCCCCCTCTGGAAGGCTTTGTAATGAATCGGGTACAAGGTGATTATTTTGAAACCCTACTCTATAA
GATATTTGTGTCTATAGATGAACACACTAATGTTGCAGAGCTTGCAAATGTCCTTGAGATAGACTTATCG
CTGGTGAAGAATGCTGTTTCAATGTATTGCCGATTGGGCTTTGCCCATAAGAAGGGACAAGTGATAAATT
TGGATCAACTTCATTCGTCATGGAAGAATGTTCCATCTGTGAATAGACTAAAGAGCACATTAGACCCACA
AAAGATGCTCTTATCGTGGGATGGCGGGGAGAGTAGGAGTCCCGTGCAAGAAGCCTCTTCTGCTACTGAC
ACAGACACAAATAGTCAAGAGGATCCAGCTGACACGGCCAGTGTGAGCAGTTTGAGTCTGTCCACTGGGT
ACACAAAGCGAATTGCATTCCTGTTTGACTCCACTCTGACTGCATTCTTAATGATGGGAAACCTTTCACC
GAACTTGAAAAGCCACGCAGTCACCATGTTTGAAGTAGGCAAACTCTCAGATGAGTCTCTGGACAGCTTC
CTTATAGAATTAGAGAAGGTTCAGAGCACTGGTGAAGGAGAAGCACAGAGATACTTTGACCACGCACTTA
CTCTGAGGAACACTATCCTCTTCCTGCGTCATAATAAGGATCTGGTGGCTCAGACCTCTCAGCCAGACCA
GCCCAACTATGGTTTCCCCCTGGATCTCTTACGCTGCGAAAGCCTTCTTGGTTTGGACCCAGCAACTTGC
AGCAGAGTTCTAAACAAAAACTACACACTGCTTGTTTCCATGGCGCCTCTTACCAATGAGATCCGGCCAG
TCAGCAGCTGCACCCCGCAGCATATCGGACCAGCTATCCCAGAAGTCAGTTCTGTCTGGTTTAAATTGTA
TATTTACCATGTCACTGGGCAAGGACCACCATCTCTCTTACTGTCCAAAGGTACAAGACTTCGGAAACTG
CCAGATATATTCCAGGGTTATGATCGGTTACTTATAACCTCTTGGGGCCATGACCCTGGGGTCGTTCCTG
CTTCAAACGTTCTCACGATGCTGAATGATGCTTTAACCCACTCAGCAGTGCTCATTCAGGGACATGGTTT
GCATGGGGTAGGAGAGACTGTCCATATACCCTTTCCATTTGATGAAGCAGAGCTGCAAGGAGAGTTCACC
CGTGCCAGTATGGGTGTTCATAAAGCACTGCAGATTCTGCGGAGCAGAGTGGACTTGCAGCATTTCTGCG
GCTATGTCACCATGTTGAATGCTTCTAGCCAGCTTGCAAGTAGGAAGCTCAGTGAGGCTTCTGATGAGAG
AGGCGAGCCTGATTTGGCTTCTAGTTCAGATGTAAATGGGAGCACAGAGTCGTTTGAAATGGTCATTGAG
GAAGCAAGTACAGATTTGGCGACAAAACCAAACTCTGGGGCCACAGCAGAAGCAGATTGGGTTCCTCTTG
AGCTGTGTTTTGGAATTCCTTTGTTCAGTTCCGAATTAAACCGGAAAGTTTGTCAGAAAATAGCTACCCA
TGGCCTGTGCAGGAAAGAGAGCCTTCAAAGTCTCTTACATTCCAGTAGAAAACTCTCCCTGCAAGTCCTT
AACTTTGTTCATTCATTCCAGGAAGGTGCTGCTACTCTGGATCTCCACGCGGAGCCTGGCTTCTCAAGTG
TGCTTTCACAGTCGCCCTGCGCTGACATGGGAGTTCCACTTCCGGCCAAAAACTTAATGTTTAAAGATGG
TGTCTTATCAGAGTGGAGCGGACGCTCACCTTCCTCCCTGCTCATCGCTAGTCTCCATTTGTAG

Translation (837 aa):
MNIDVEFHIRHNYPWSKLPTNVKQSLGNSQREYEKQVVLYSIRNQLRYRNNLVKHVKKDERKYYEELLKY
SRDHLMLYPYHLSDIMVKGLRITPFSYYAGIMEDIMNSEKSYDSLPNFTAADCLRLLGIGRNQYIDLMNQ
CRSSKKFFRRKTARDLLPMKPVEIAIEAWWVVQAGYITEDDIKICTFPEKGAIDKIIDSGPQLSGSLDYN
VVHSLYNKGFIYLDVPISDDSCIAVPPLEGFVMNRVQGDYFETLLYKIFVSIDEHTNVAELANVLEIDLS
LVKNAVSMYCRLGFAHKKGQVINLDQLHSSWKNVPSVNRLKSTLDPQKMLLSWDGGESRSPVQEASSATD
TDTNSQEDPADTASVSSLSLSTGYTKRIAFLFDSTLTAFLMMGNLSPNLKSHAVTMFEVGKLSDESLDSF
LIELEKVQSTGEGEAQRYFDHALTLRNTILFLRHNKDLVAQTSQPDQPNYGFPLDLLRCESLLGLDPATC
SRVLNKNYTLLVSMAPLTNEIRPVSSCTPQHIGPAIPEVSSVWFKLYIYHVTGQGPPSLLLSKGTRLRKL
PDIFQGYDRLLITSWGHDPGVVPASNVLTMLNDALTHSAVLIQGHGLHGVGETVHIPFPFDEAELQGEFT
RASMGVHKALQILRSRVDLQHFCGYVTMLNASSQLASRKLSEASDERGEPDLASSSDVNGSTESFEMVIE
EASTDLATKPNSGATAEADWVPLELCFGIPLFSSELNRKVCQKIATHGLCRKESLQSLLHSSRKLSLQVL
NFVHSFQEGAATLDLHAEPGFSSVLSQSPCADMGVPLPAKNLMFKDGVLSEWSGRSPSSLLIASLHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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