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Report for CCDS37199.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37199.1 Public Mus musculus 15 Mcrs1 23 108 98 CCDS HistoryNCBI Gene:51812Re-query CCDS DB by CCDS ID:37199.1Re-query CCDS DB by GeneID:51812See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37199.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041190.16 ENSMUSP00000043901.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041190.16Link to Ensembl Protein Viewer:ENSMUSP00000043901.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000041190Re-query CCDS DB by Protein ID:ENSMUSP00000043901
Original member NCBI NM_016766.3 NP_058046.2 Updated not alive Link to Nucleotide Sequence:NM_016766.3Link to Protein Sequence:NP_058046.2Re-query CCDS DB by Nucleotide ID:NM_016766Re-query CCDS DB by Protein ID:NP_058046
Current member NCBI NM_016766.4 NP_058046.2 Accepted alive Link to Nucleotide Sequence:NM_016766.4Link to Protein Sequence:NP_058046.2Re-query CCDS DB by Nucleotide ID:NM_016766Re-query CCDS DB by Protein ID:NP_058046Link to BLAST:NP_058046.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058046.2 462 Q99L90 462 100% 0 0

Chromosomal Locations for CCDS 37199.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99243134 99243220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99243318 99243445 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99243680 99243767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99243925 99244007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99244145 99244237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99244348 99244376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99244648 99244723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99246927 99247065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99247279 99247387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99248451 99248560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99248702 99248860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99249368 99249506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99249876 99250014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99250463 99250472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1389 nt):
ATGGACAAAGATTCTCAGGGGCTGCTAGACTCGTCCCTGATGGCGTCAGGCACAGCCAGCCGCTCCGAGG
ATGAGGAGTCACTGGCAGGGCAGAAGCGAGCATCCTCCCAGGCCCTGGGCACTATCCCCAAACGCAGAAG
CTCCTCCAGGTTCATCAAAAGGAAGAAATTCGATGATGAACTGGTAGAGAGCAGCCTGGCCAAATCCTCC
ACCCGGGTGAAGGGGGCCGGCGGGGTGGAGTCAGGCCGCTGCTCAGGGAGCGAGCCCTCCTCTAGTGAGA
AGAAGAAGGTATCCAAGGCTCCCAGTACTCCTGTACCTCCCAGCCCTGCCCCAACCCCTGGGCTGACCAA
GCGTGTGAAGAAAAGCAAACAGCCACTTCAGGTGACCAAGGATCTGGGCCGATGGAAGCCTGCAGATGAC
CTCCTCCTCATCAATGCTGTGCTGCAGACTAACGACCTGACATCTGTCCACCTGGGTGTGAAGTTCAGCT
GCCGCTTCACCCTTCGGGAAGTTCAGGAGCGCTGGTACGCCCTGCTCTACGACCCTGTCATCTCCAAGCT
GGCTTGCCAGGCCATGAGGCAGTTACACCCAGAAGCCATTGCAGCCATTCAGAGCAAGGCCCTGTTCAGC
AAGGCTGAGGAGCAGCTGCTGAGCAAAGTGGGATCAAGCAGCCAGCCCACCTTGGAGACCTTCCAGGACT
TGCTGCATACACACCCTGATGCCTTCTACCTGGCTCGTACTGCCAAGGCTCTGCAGGCCCACTGGCAGCT
CATGAAACAGTATTACCTACTCGAGGATCAGACAGTGCAGCCACTGCCTAAGGGGGACCAAGTGCTCAAC
TTCTCAGATGCAGAGGACCTGATTGACGACAGTAAGCTCAAGGACATGCGAGATGAAGTCCTGGAACATG
AGCTGACAGTGGCTGACCGGCGCCAGAAACGAGAGATCCGGCAGCTGGAACAGGAACTGCATAAGTGGCA
GGTGCTAGTGGACAGCATCACAGGCATGGGCTCTCCAGACTTCGACAACCAGACCCTGGCCGTGCTGCGG
GGCCGCATGGTGCGGTACCTAATGCGCTCTCGTGAGATAACCCTGGGCAGAGCAACCAAGGACAACCAGA
TTGACGTGGACCTGTCTCTGGAGGGTCCGGCTTGGAAGATCTCCCGAAAGCAAGGTGTCATCAAGTTGAA
AAACAATGGTGACTTCTTCATTGCCAACGAGGGCCGGCGGCCCATCTATATCGATGGGCGACCAGTGCTG
TGCGGCTCCAAGTGGCGCCTTAGCAACAACTCTGTGGTAGAGATCGCCAGCCTGCGATTCGTCTTCCTCA
TCAACCAGGACCTCATTGCCCTCATCCGGGCTGAGGCTGCCAAGATCACCCCACAGTGA

Translation (462 aa):
MDKDSQGLLDSSLMASGTASRSEDEESLAGQKRASSQALGTIPKRRSSSRFIKRKKFDDELVESSLAKSS
TRVKGAGGVESGRCSGSEPSSSEKKKVSKAPSTPVPPSPAPTPGLTKRVKKSKQPLQVTKDLGRWKPADD
LLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLACQAMRQLHPEAIAAIQSKALFS
KAEEQLLSKVGSSSQPTLETFQDLLHTHPDAFYLARTAKALQAHWQLMKQYYLLEDQTVQPLPKGDQVLN
FSDAEDLIDDSKLKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVDSITGMGSPDFDNQTLAVLR
GRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVL
CGSKWRLSNNSVVEIASLRFVFLINQDLIALIRAEAAKITPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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