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Report for CCDS37353.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37353.1 Public Mus musculus 16 Dzip3 23 108 98 CCDS HistoryNCBI Gene:224170Re-query CCDS DB by CCDS ID:37353.1Re-query CCDS DB by GeneID:224170See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37353.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114516.7 ENSMUSP00000110161.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114516.7Link to Ensembl Protein Viewer:ENSMUSP00000110161.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114516Re-query CCDS DB by Protein ID:ENSMUSP00000110161
Original member Current member NCBI NM_027341.2 NP_081617.1 Accepted alive Link to Nucleotide Sequence:NM_027341.2Link to Protein Sequence:NP_081617.1Re-query CCDS DB by Nucleotide ID:NM_027341Re-query CCDS DB by Protein ID:NP_081617Link to BLAST:NP_081617.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081617.1 998 Q7TPV2-2 998 100% 0 0

Chromosomal Locations for CCDS 37353.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 48925992 48926102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48927542 48927643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48927730 48927855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48928296 48928416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48929616 48929755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48931168 48931293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48933794 48933895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48935499 48935586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48936970 48937073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48938434 48938530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48941652 48941720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48942076 48942203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48943457 48943552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48944763 48944928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48945598 48945623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48947675 48947722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48948407 48948576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48950001 48950033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48953727 48953803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48957653 48957705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48958419 48958511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48959655 48959756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48961108 48961227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48972222 48972336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48975423 48975547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48977882 48977962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48979546 48979662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48980899 48981054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48982060 48982132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 48984535 48984566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2997 nt):
ATGGATTCTCTAGCAGAAGAATTTTTTGTAAGTGGAAATCCTGATGTGGAGGAACAGACCAAGGAAGAAA
CTGAGATTATAGCAGAGAAACCAGTCACTCAGCTGGACAAACAGAAAATGGATATATCTGCTGATCCTGA
GCCTGTTAACGCACTATTAGAAATAAAGAAGGTATTAAATCCAATCAGTGCTCTTCCCAAAGGTGTGTTC
CCTAACATTGAAAAGTTCATACAAGAAGATTTCTCTTTCCAGACTATGCAGAGGGAAGTTACAACTCATA
GCCAGACTGGGGAAGAAATTGTTCCTGCTCTAACATTACATTTTTTGATAACACAACTGGAAATGGCACT
TAGAAACATTCAAGCTTCTAATTATACTGCACAACAAATTAATGTTGGTTATTATTTGACATTACTATTT
TTGTATGGAGTGGCACTCACTGAAAGAGCAAAGAAAGAGGACTGCATAGAAGCTGAAAATAAATTTCTGG
TGATGAAGATGGTGATCCAAGAAAGTGAGATTTGTGAAAACTTTATGTGTTTAGTTTATTTTGGACGTGG
TTTACTTCGATGTGCTCAGAAGAGATATAATGGAGCACTACTAGAATTTTACAAAAGCTTACAAGAAATA
GGAGATACAGATGATAATTGGTTTGAAGTAGATCCTACAGATGATGAAGATTTACCTACAACCTTCAAAG
ATAGTCTCAATAATTTTATCAAAACAACTGAAAGTAATATAATGAAAGAGACCATTTGCAGTTATCTTGA
TTGTGAGCGTTCTTGTGAAGCTGACATTTTAAAGAACACCAATTATAAGGGATTTTTCCAGCTAATGTGC
AGTAAAAGTTGCTGTATTTACTTCCATAAAATTTGTTGGAAAAAGTTCAAGAACTTAAAGTATCCAGGAG
AAAGTGATCAGAGTTTTAGTGGGCAAAAATGTTTGAAAGAAGGATGTCCAGGTGACATGGTCAGGATGCT
ACAATGTGATGTGCCTGGAATTGTCAAAATTTTGTTTGAAGTGGTGAGAAAGGATGAATATATAACCATT
GAAAACTTAGGAGCAAGTTACAAGAATTTGATGTCTCTGGAACTAACTGACACTGATATTAGACCGAAAT
TCAATTTAAAACCAAACACAAAAGGAATTACTCTACAGTCAATAACAGGCAGTCAGCGTTTAGATGTAGA
AGAGTTCCAGAATGATGAAGAAGACTTGAGTCCACCTGTGATGGAATATAATATCGATGTGAAATCAAAC
ACTGAGATACAGTTAGCAGAGATAAATAAAGATGTAGCCTCGATACCTAGTGAATCTTCAACAGAATCTG
TTAAAGATCTTCAGGAGGTCAAAAGTAAAACAAAGAAGAAGAAAAGAACTAAGAGTAATAAAAAGGATAA
GGATTCAGAAGATGAGCAAGTCTCATATATGGTAGAAAAGGACGACCAGCTGGAGACAGAACAAGTAGAC
GTGAACACACTCAGTACATACATGAAAACTGATACAAGTGATGCACAAGAAGATTCTGCAGCTGAGGACA
AGTTCTGTAGCCTGGATGAACTGCATATTCTAGATATGGTAGAGCAGGGCTCATCTGGAAAGGAAAGTAC
AGACTTCAAAGAAACTGAAAAGGAAAGGCTTGCTCATCAACATCAGCTTTATAAATTGCAGTATGAATGT
GAAGATTACAAAAGGCAACTGAAAACAGTGACATTTCGGTGGCAGGAAAATCAAATGCTGATCAAAAAGA
AAGAAAAGATTATTGTATCTCTTAACCAACAAGTGGCTTTTGGGATCAATAAAATGTCCAAATTACAGCG
CCAAATCCATGCTAAAGATGATGAAATCAAGAACCTTAAAGACCAACTTTCCTTGAAAAGATCTCAGTGG
GAAATGGAGAAGCATAATCTGGAAAGCACAGTTAAAACATATTTAAACAAACTAAATGCAGAAACCAGCA
GAGCCTTAACAGCCGAGGTGTACTTTTTACAGTGTCGTAGAGACTTTGGTTTACTACACCTCGAGCAGAC
AGAAAAAGAGTGCCTCAATCAGCTGGCCAGGGTGACACACATGGCAGCAAGCAACCTAGAATCACTTCAA
CTAAAAGCTGCTGTAGATAGTTGGAATGCTATTGTGGCGGATGTTCGAAACAAGATTGCATTCCTCAGGA
CACAGTACAATGAACAGATCAACAAGGTTAAGCAGGGGTTTGCCTTGAGTACCTTGCCTCCAGTCCAGCT
TCCTCCACCACCACCAAGTCCTGAGATACTGATACAGCAATTCTTAGGAAGACCCCTTGTGAAGGAATCT
TTCTTTCGACCCATACTTACTGTCCCTCAAATGCCTGCAGTTTGCCCTGGAGTCATCTCTGCAGCTGTAC
AACCTAGACCACCCCTGATGCCTGGTATAACCTGGGCTATGCCAACACCTATAGGTGATACTGTGTCACC
GAGTGCAAGTCTGTGCAGTGAACCTCTCATGATAAACTGGGAGAGGATTACAGACAGGCTGAAAACTGCT
TTTCCACAACAGACAAGGAAAGAGCTAACAGATTTCTTACAACAGTTAAAGGATTCTCATGGAAAGTCCG
TGTCTCGACTGACATTTGATGAAATTGTTTACAAAATTTCTCAAATGATTGAGCCCAAGAAATCTGAGAG
TGAAGAAAAGTCTGCTCAAGATGGCAATAATGCTTCACCCAGCCACACTGCATCACAGCCTAATGCTCCC
CAGGACCCCAAGTCAGCACAAGGTTCTGCCACATGGGAAGGAGACAAAGACATGGATAATGAAGAGGAAG
AAGAGGAGCCTTGTGTAATCTGTCATGAGAATTTGTCTCCAGAAAACCTTTCAGTTTTGCCTTGTGCTCA
CAAATTTCACTCTCAGTGCATTAGACCATGGTTGATGCAACAGGGCACATGCCCCACCTGCAGACTCCAT
GTTTTGCAACCAGAAGAATTCCCTGGCCACCCCAACGGGCAGTTACCCAAGATCTGA

Translation (998 aa):
MDSLAEEFFVSGNPDVEEQTKEETEIIAEKPVTQLDKQKMDISADPEPVNALLEIKKVLNPISALPKGVF
PNIEKFIQEDFSFQTMQREVTTHSQTGEEIVPALTLHFLITQLEMALRNIQASNYTAQQINVGYYLTLLF
LYGVALTERAKKEDCIEAENKFLVMKMVIQESEICENFMCLVYFGRGLLRCAQKRYNGALLEFYKSLQEI
GDTDDNWFEVDPTDDEDLPTTFKDSLNNFIKTTESNIMKETICSYLDCERSCEADILKNTNYKGFFQLMC
SKSCCIYFHKICWKKFKNLKYPGESDQSFSGQKCLKEGCPGDMVRMLQCDVPGIVKILFEVVRKDEYITI
ENLGASYKNLMSLELTDTDIRPKFNLKPNTKGITLQSITGSQRLDVEEFQNDEEDLSPPVMEYNIDVKSN
TEIQLAEINKDVASIPSESSTESVKDLQEVKSKTKKKKRTKSNKKDKDSEDEQVSYMVEKDDQLETEQVD
VNTLSTYMKTDTSDAQEDSAAEDKFCSLDELHILDMVEQGSSGKESTDFKETEKERLAHQHQLYKLQYEC
EDYKRQLKTVTFRWQENQMLIKKKEKIIVSLNQQVAFGINKMSKLQRQIHAKDDEIKNLKDQLSLKRSQW
EMEKHNLESTVKTYLNKLNAETSRALTAEVYFLQCRRDFGLLHLEQTEKECLNQLARVTHMAASNLESLQ
LKAAVDSWNAIVADVRNKIAFLRTQYNEQINKVKQGFALSTLPPVQLPPPPPSPEILIQQFLGRPLVKES
FFRPILTVPQMPAVCPGVISAAVQPRPPLMPGITWAMPTPIGDTVSPSASLCSEPLMINWERITDRLKTA
FPQQTRKELTDFLQQLKDSHGKSVSRLTFDEIVYKISQMIEPKKSESEEKSAQDGNNASPSHTASQPNAP
QDPKSAQGSATWEGDKDMDNEEEEEEPCVICHENLSPENLSVLPCAHKFHSQCIRPWLMQQGTCPTCRLH
VLQPEEFPGHPNGQLPKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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