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Report for CCDS37645.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37645.1 Public Mus musculus 17 9830107B12Rik 23 108 98 CCDS HistoryNCBI Gene:328829Re-query CCDS DB by CCDS ID:37645.1Re-query CCDS DB by GeneID:328829See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37645.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063481.8 ENSMUSP00000070138.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063481.8Link to Ensembl Protein Viewer:ENSMUSP00000070138.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000063481Re-query CCDS DB by Protein ID:ENSMUSP00000070138
Original member Current member NCBI NM_177824.4 NP_808492.1 Accepted alive Link to Nucleotide Sequence:NM_177824.4Link to Protein Sequence:NP_808492.1Re-query CCDS DB by Nucleotide ID:NM_177824Re-query CCDS DB by Protein ID:NP_808492Link to BLAST:NP_808492.1

Chromosomal Locations for CCDS 37645.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 48128462 48128574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48145397 48145708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 48145951 48146008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (483 nt):
ATGGCCTGGGAGCCCACATACCTGCTCTCCCCAGTGCTGCTGCTGCTCCTGGCCTCAGGCTCCTGGACAC
AG
AACCCAGAGTTACTTCGAGTACTGGAGGGCAAGACTGTTTCTGTGACATGCATGTATGATCCACTCTA
C
AACTCTGATGAGAAGATCTGGTGTAAGCAAATAGACAACTTGTGTTACCCCTTGGTCAGCAAAGGTGCC
GAG
AAGCCAAGATTCTCCATCCTACAGTCTTCTAAGTTCAACTTCTTCACTGTCACCATGAGTAAGCTCA
GG
ATGAGTGACTCGGGCATCTATCACTGTGGGATCGCTGCAAATACCAGGATAACTTATCTCAGAGGTAT
C
CAACTGGTGGTGTCAAAAGGGGCTCTGTATCCAGTGTTACTATTCCCGTGGTCTGTGGACTCCTCAGCA
AGA
CACTGGTATTCACGGTCTTATTCATTGTCACACAGAAGTCATTTGGACGACAGGCCATGA


Translation (160 aa):
MAWEPTYLLSPVLLLLLASGSWTQNPELLRVLEGKTVSVTCMYDPLYNSDEKIWCKQIDNLCYPLVSKGA
E
KPRFSILQSSKFNFFTVTMSKLRMSDSGIYHCGIAANTRITYLRGIQLVVSK
GALYPVLLFPWSVDSSA
R
HWYSRSYSLSHRSHLDDRP




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser