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Report for CCDS37735.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37735.1 Public Mus musculus 18 Usp14 23 108 98 CCDS HistoryNCBI Gene:59025Re-query CCDS DB by CCDS ID:37735.1Re-query CCDS DB by GeneID:59025See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37735.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092096.13 ENSMUSP00000089728.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092096.13Link to Ensembl Protein Viewer:ENSMUSP00000089728.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000092096Re-query CCDS DB by Protein ID:ENSMUSP00000089728
Original member Current member NCBI NM_021522.4 NP_067497.2 Accepted alive Link to Nucleotide Sequence:NM_021522.4Link to Protein Sequence:NP_067497.2Re-query CCDS DB by Nucleotide ID:NM_021522Re-query CCDS DB by Protein ID:NP_067497Link to BLAST:NP_067497.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067497.2 493 Q9JMA1 493 100% 0 0

Chromosomal Locations for CCDS 37735.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 9996097 9996248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9997173 9997280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 9997717 9997774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10000495 10000623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10001771 10001863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10002368 10002433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10004896 10005010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10005630 10005715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10007767 10007847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10009952 10010082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10012213 10012271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10016541 10016644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10017991 10018095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10022818 10022850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10024534 10024679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 10029913 10029928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGCCACTCTACTCTGTTACAGTAAAATGGGGAAAGGAGAAGTTTGAAGGTGTAGAATTGAATACTGATG
AACCTCCAATGGTGTTCAAAGCCCAGCTTTTTGCATTGACTGGAGTCCAGCCAGCCAGACAAAAAGTTAT
GGTGAAAGGAGGAACCCTGAAGGATGATGACTGGGGAAACATCAAAATGAAAAATGGAATGACTGTACTA
ATGATGGGGTCAGCAGATGCTCTTCCAGAAGAACCCTCTGCTAAAACTGTCTTCGTAGAAGACATGACAG
AAGAACAGTTAGCAACCGCTATGGAATTGCCATGTGGATTGACAAACCTTGGTAACACTTGTTACATGAA
TGCTACAGTTCAGTGTATTCGTTCTGTGCCTGAACTCAAAGATGCCCTTAAAAGGTATGCAGGTGCGTTG
AGAGCTTCAGGAGAAATGGCTTCAGCACAGTATATTACTGCAGCTCTTAGAGATTTGTTTGATTCCATGG
ATAAAACTTCTTCTAGTATCCCACCTATTATTCTGCTGCAGTTTCTGCACATGGCCTTTCCACAGTTTGC
AGAGAAGGGCGAACAAGGGCAGTATCTTCAGCAGGATGCTAACGAATGCTGGATACAAATGATGAGAGTC
CTGCAACAGAAACTAGAAGCCATAGAGGATGATTCTGGTAGAGAGACGGATTCTTCATCTGCACCAGCGG
TGACACCTTCTAAAAAGAAAAGCTTAATTGATCAATATTTTGGTGTTGAGTTTGAAACTACCATGAAATG
TACAGAATCTGAAGAAGAAGAGGTCACCAAAGGAAAGGAAAATCAACTTCAACTTAGTTGTTTCATTAAC
CAGGAAGTGAAGTATCTTTTCACAGGGCTGAAATTGCGACTTCAGGAAGAAATTACTAAACAGTCTCCAA
CACTGCAGAGAAATGCTTTGTACATCAAATCTTCTAAGATCAGCCGGCTACCTGCTTACTTAACTATTCA
AATGGTTCGATTTTTTTATAAAGAGAAAGAATCTGTGAACGCCAAAGTTCTTAAGGATGTTAAGTTTCCT
CTTATGTTGGATGTGTATGAACTCTGCACACCAGAACTTCAAGAGAAAATGGTCTCTTTTCGGTCAAAAT
TCAAGGATCTAGAAGATAAAAAAGTGAATCAGCAACCAAATGCAAATGACAAGAATAGTCCTCCGAAAGA
GATTAAGTATGAACCCTTTTCATTTGCTGACGATATTGGCTCCAATAATTGTGGCTACTATGACTTACAA
GCAGTGTTAACTCACCAGGGAAGATCTAGTTCTTCAGGTCATTATGTATCATGGGTGAGAAGAAAACAAG
ATGAATGGATCAAATTTGATGATGATAAGGTCAGCATTGTAACCCCAGAAGATATTCTGCGGCTGTCTGG
TGGTGGAGACTGGCACATTGCTTATGTTCTACTTTATGGGCCTCGAAGAGTTGAAATAATGGAAGAAGAA
AGTGAACAGTAA

Translation (493 aa):
MPLYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMVKGGTLKDDDWGNIKMKNGMTVL
MMGSADALPEEPSAKTVFVEDMTEEQLATAMELPCGLTNLGNTCYMNATVQCIRSVPELKDALKRYAGAL
RASGEMASAQYITAALRDLFDSMDKTSSSIPPIILLQFLHMAFPQFAEKGEQGQYLQQDANECWIQMMRV
LQQKLEAIEDDSGRETDSSSAPAVTPSKKKSLIDQYFGVEFETTMKCTESEEEEVTKGKENQLQLSCFIN
QEVKYLFTGLKLRLQEEITKQSPTLQRNALYIKSSKISRLPAYLTIQMVRFFYKEKESVNAKVLKDVKFP
LMLDVYELCTPELQEKMVSFRSKFKDLEDKKVNQQPNANDKNSPPKEIKYEPFSFADDIGSNNCGYYDLQ
AVLTHQGRSSSSGHYVSWVRRKQDEWIKFDDDKVSIVTPEDILRLSGGGDWHIAYVLLYGPRRVEIMEEE
SEQ


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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