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Report for CCDS37995.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37995.1 Public Mus musculus 19 Cwf19l1 23 108 98 CCDS HistoryNCBI Gene:72502Re-query CCDS DB by CCDS ID:37995.1Re-query CCDS DB by GeneID:72502See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37995.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026218.6 ENSMUSP00000026218.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026218.6Link to Ensembl Protein Viewer:ENSMUSP00000026218.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000026218Re-query CCDS DB by Protein ID:ENSMUSP00000026218
Original member Current member NCBI NM_001081077.1 NP_001074546.1 Accepted alive Link to Nucleotide Sequence:NM_001081077.1Link to Protein Sequence:NP_001074546.1Re-query CCDS DB by Nucleotide ID:NM_001081077Re-query CCDS DB by Protein ID:NP_001074546Link to BLAST:NP_001074546.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074546.1 537 Q8CI33-1 537 100% 0 0

Chromosomal Locations for CCDS 37995.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44110516 44110660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44112949 44113046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44113674 44113793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44114524 44114733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44120873 44120952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44121849 44121960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44123144 44123284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44124808 44124892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44127366 44127484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44129198 44129412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44131412 44131513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44132086 44132164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44133000 44133084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44135766 44135788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1614 nt):
ATGGCTCAGAAGCCACTGCGTCTCTTGGCCTGTGGAGATGTTGAAGGAAAGTTTGATGTTTTATTCAATA
GAGTTCGGACAATTCAGAAGAAAAGTGGAAACTTTGATCTGCTGTTGTGTGTAGGAAACTTTTTTGGCTC
TGCCCAGGATGCTGAGTGGGAGGAGTATAAGACCGGCAACAAGAAAGCTCCTATTCAGACATATGTGCTT
GGTGCCAATAACGAGGAGACAGCAAACTATTTCCAGGGTGCTGATGGCTGTGAATTGGCTGAAAACATCA
CTTACCTGGGTCGGAAAGGTGTCTTCACTGGAAGCTCGGGGCTACAGATTGTATACCTCAGTGGGACCGA
GTCCTTAGATGAACCAGTCCCAGCCCACAGCTTTAGTCCCAAGGATGTGTCTTCTCTGAGAACAATGCTG
TGCTCGGCTTCCCAGTTTAAAGGTGTTGATATCTTACTCACGTCCCCGTGGCCCAAGTACGTGGGGAGCT
TTGGGAATTCCTCTGGAGAAGTAGACACCAAAAACTGTGGCTCAGCTTTGATCTCCAGCCTCGCCGTGAG
CTTGAAACCGAGGTATCATTTTGCTGCTTTGGAAAAGTCGTATTATGAGAGGCTTCCGTACCGAAACCAT
GTTGTTCTACAAGAAAGCGCGCAGCATGCCACTCGCTTCATAGCGCTGGCGAATGTTGGAAATCCAGAAA
AGAAGAAGTATCTTTATGCCTTCAGTATTGTTCCCATGAAGCTGATGGCTGTAGCCGAACTGGTAAAGCA
GCCTCCGGACGTCACCGAGAACCCTTACCGAGACTCTGGGAAGCAGGCAGCCGGAGGGAAACACATTCCC
GCCCCTCAGGAAGAGTCAGCCTGTCAGTTCTTCTTCGATTTGAGTGAAAAGCAGGGAAGGAAGCGGCCGT
CCACAGGCAGGGATACCAGGCCTCCCCACGCTAAGCAGCCTCGCAAGCCTCCTCAGCCTCCAGGCCCTTG
TTGGTTTTGCCTCGCCAGCCCTGAAGTGGAAAAGCACCTGGTGGTCAACATTGGCACACATTGCTACCTT
GCCCTGGCCAAAGGAGGCTTATCTGATGACCATGTCCTCATCCTGCCCATTGGACACTACCAGTCCGTTG
TGGAGCTCTCGGCAGAGGTGGTGGAAGAAGTGGAGAAATATAAGGCTACTCTGCAACGCTTCTTTAAGAG
TCGGGGGAAGCGTTGTGTTCTATTTGAAAGAAATTATAGGAGCCATCACCTCCAGCTTCAGGTCATTCCT
GTGCCCCTCAGCTGCTGTGCTACAGATGACATTAAAGATGCCTTCATTACCCAGGCACAGGAGCAGCAGA
TAGAGCTGTTGGAGATTCCAGAACACTCAGACATCAAACAGATTGCACAGCCAGGAGCAGCATATTTTTA
TGTTGAACTCGACACAGGAGAAAAGCTTTTCCACAGAATTAAAAAGAATTTTCCTTTGCAATTTGGAAGG
GAGGTCCTGGCCAGCGAAGCTATTCTCAACATTCCTGAGAAGGCTGACTGGAGGCAGTGTCAAACCAGCA
AGGACGAGGAGGAGGCCCTGGCCCGCCGCTTCCGGAAAGACTTTGAACCCTTTGACTTCACTCTGGATGA
CTAG

Translation (537 aa):
MAQKPLRLLACGDVEGKFDVLFNRVRTIQKKSGNFDLLLCVGNFFGSAQDAEWEEYKTGNKKAPIQTYVL
GANNEETANYFQGADGCELAENITYLGRKGVFTGSSGLQIVYLSGTESLDEPVPAHSFSPKDVSSLRTML
CSASQFKGVDILLTSPWPKYVGSFGNSSGEVDTKNCGSALISSLAVSLKPRYHFAALEKSYYERLPYRNH
VVLQESAQHATRFIALANVGNPEKKKYLYAFSIVPMKLMAVAELVKQPPDVTENPYRDSGKQAAGGKHIP
APQEESACQFFFDLSEKQGRKRPSTGRDTRPPHAKQPRKPPQPPGPCWFCLASPEVEKHLVVNIGTHCYL
ALAKGGLSDDHVLILPIGHYQSVVELSAEVVEEVEKYKATLQRFFKSRGKRCVLFERNYRSHHLQLQVIP
VPLSCCATDDIKDAFITQAQEQQIELLEIPEHSDIKQIAQPGAAYFYVELDTGEKLFHRIKKNFPLQFGR
EVLASEAILNIPEKADWRQCQTSKDEEEALARRFRKDFEPFDFTLDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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