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Report for CCDS38104.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38104.1 Public Mus musculus 2 Dpm2 23 108 98 CCDS HistoryNCBI Gene:13481Re-query CCDS DB by CCDS ID:38104.1Re-query CCDS DB by GeneID:13481See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38104.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028151.6 ENSMUSP00000028151.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028151.6Link to Ensembl Protein Viewer:ENSMUSP00000028151.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000028151Re-query CCDS DB by Protein ID:ENSMUSP00000028151
Original member Current member NCBI NM_010073.2 NP_034203.1 Accepted alive Link to Nucleotide Sequence:NM_010073.2Link to Protein Sequence:NP_034203.1Re-query CCDS DB by Nucleotide ID:NM_010073Re-query CCDS DB by Protein ID:NP_034203Link to BLAST:NP_034203.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034203.1 84 Q9Z324 84 100% 0 0

Chromosomal Locations for CCDS 38104.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 32570910 32570912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32571206 32571295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32572297 32572399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32572959 32573017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (255 nt):
ATGGCCACCGGGACAGACCAAGCAGTAGGATTTGGCCTTGTCGCCGTTAGCTTGATCATCTTCACCTACT
AC
ACCACTTGGGTGATTCTCTTGCCATTCATTGACAGCCAGCATGTCATCCACAAATACTTCCTGCCCCG
C
GCCTACGCCGTCCTCCTCCCGTTGGCCGCAGGCCTCCTGCTGCTCCTATTTGTGGGATTGTTCATCACC
TAT
GTGATGCTGAAGAGCCAGAAGATAACCAAGAAGGCTCAGTGA


Translation (84 aa):
MATGTDQAVGFGLVAVSLIIFTYYTTWVILLPFIDSQHVIHKYFLPRAYAVLLPLAAGLLLLLFVGLFIT
Y
VMLKSQKITKKAQ




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser