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Report for CCDS42025.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42025.1 Public Homo sapiens 15 ZFYVE19 24 110 108 CCDS HistoryNCBI Gene:84936Re-query CCDS DB by CCDS ID:42025.1Re-query CCDS DB by GeneID:84936See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42025.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000355341.8 ENSP00000347498.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000355341.8Link to Ensembl Protein Viewer:ENSP00000347498.4Re-query CCDS DB by Nucleotide ID:ENST00000355341Re-query CCDS DB by Protein ID:ENSP00000347498
Original member Current member NCBI NM_001077268.2 NP_001070736.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001077268.2Link to Protein Sequence:NP_001070736.1Re-query CCDS DB by Nucleotide ID:NM_001077268Re-query CCDS DB by Protein ID:NP_001070736Link to BLAST:NP_001070736.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070736.1 471 Q96K21-1 471 100% 0 0

Chromosomal Locations for CCDS 42025.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 40807590 40807868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40809119 40809240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40809408 40809458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40809852 40809970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40810071 40810216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40810649 40810757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40812699 40812902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40813338 40813417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40813713 40813811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40813943 40814070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40814148 40814226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1416 nt):
ATGAACTACGACTCCCAGCAGCCCCCGTTGCCGCCGCTGCCGTACGCTGGCTGCAGGAGAGCGTCCGGAT
TCCCTGCTCTAGGTCGCGGCGGGACAGTGCCAGTGGGCGTGTGGGGCGGGGCAGGGCAGGGAAGGGAAGG
GCGGAGCTGGGGTGAGGGTCCAAGGGGCCCAGGACTTGGCCGGCGTGATCTCAGCTCTGCAGACCCTGCG
GTGCTGGGAGCCACCATGGAGAGTAGGTGCTACGGCTGCGCTGTCAAGTTCACCCTCTTCAAGAAGGAGT
ACGGCTGTAAGAATTGTGGCAGGGCCTTCTGTTCAGGCTGCCTAAGCTTCAGTGCAGCAGTGCCTCGGAC
TGGGAACACCCAACAGAAAGTCTGCAAGCAATGCCATGAGGTCCTGACCAGAGGGTCTTCTGCCAATGCC
TCCAAGTGGTCACCACCTCAGAACTATAAGAAGCGTGTGGCAGCCTTGGAAGCCAAGCAAAAGCCCAGCA
CTTCCCAGAGCCAGGGACTGACACGACAAGACCAGATGATTGCTGAGCGCCTAGCACGACTCCGCCAGGA
GAACAAGCCCAAGTTAGTCCCCTCACAGGCAGAGATAGAGGCACGGCTGGCTGCCCTAAAGGATGAACGT
CAGGGTTCCATCCCTTCCACCCAGGAAATGGAGGCACGACTTGCAGCGTTGCAGGGCAGAGTTCTACCTT
CTCAAACCCCCCAGCCGGCACATCACACACCGGACACCAGGACCCAAGCCCAGCAGACACAGGATCTGCT
AACGCAGCTGGCAGCTGAGGTGGCTATCGATGAAAGCTGGAAAGGAGGAGGCCCAGCTGCCTCTCTCCAG
AATGATCTCAACCAGGGTGGCCCAGGGAGCACTAATTCCAAGAGGCAGGCCAACTGGTCCTTGGAGGAGG
AGAAGAGCAGACTGCTGGCTGAGGCAGCACTTGAGTTGCGGGAGGAGAACACGAGGCAGGAACGGATTCT
GGCCCTGGCCAAGCGACTAGCCATGCTGCGGGGACAGGACCCCGAGAGAGTGACCCTCCAGGACTATCGC
CTCCCAGACAGTGATGACGACGAGGATGAGGAGACAGCCATCCAAAGAGTCCTGCAGCAGCTCACTGAAG
AAGCTTCCCTGGATGAGGCAAGTGGCTTTAACATCCCTGCAGAGCAGGCTTCTCGACCCTGGACGCAACC
CCGCGGGGCAGAGCCTGAGGCCCAGGATGTGGACCCCAGGCCTGAGGCTGAGGAAGAGGAGCTCCCCTGG
TGCTGCATCTGCAATGAGGATGCCACCCTACGCTGCGCTGGCTGCGATGGGGACCTCTTCTGTGCCCGCT
GCTTCCGAGAGGGCCATGATGCCTTTGAGCTTAAAGAGCACCAGACATCTGCCTACTCTCCTCCACGTGC
AGGCCAAGAGCACTGA

Translation (471 aa):
MNYDSQQPPLPPLPYAGCRRASGFPALGRGGTVPVGVWGGAGQGREGRSWGEGPRGPGLGRRDLSSADPA
VLGATMESRCYGCAVKFTLFKKEYGCKNCGRAFCSGCLSFSAAVPRTGNTQQKVCKQCHEVLTRGSSANA
SKWSPPQNYKKRVAALEAKQKPSTSQSQGLTRQDQMIAERLARLRQENKPKLVPSQAEIEARLAALKDER
QGSIPSTQEMEARLAALQGRVLPSQTPQPAHHTPDTRTQAQQTQDLLTQLAAEVAIDESWKGGGPAASLQ
NDLNQGGPGSTNSKRQANWSLEEEKSRLLAEAALELREENTRQERILALAKRLAMLRGQDPERVTLQDYR
LPDSDDDEDEETAIQRVLQQLTEEASLDEASGFNIPAEQASRPWTQPRGAEPEAQDVDPRPEAEEEELPW
CCICNEDATLRCAGCDGDLFCARCFREGHDAFELKEHQTSAYSPPRAGQEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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