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Report for CCDS43893.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43893.1 Public Homo sapiens 9 FUBP3 24 110 108 CCDS HistoryNCBI Gene:8939Re-query CCDS DB by CCDS ID:43893.1Re-query CCDS DB by GeneID:8939See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43893.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319725.10 ENSP00000318177.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319725.10Link to Ensembl Protein Viewer:ENSP00000318177.9Re-query CCDS DB by Nucleotide ID:ENST00000319725Re-query CCDS DB by Protein ID:ENSP00000318177
Original member Current member NCBI NM_003934.2 NP_003925.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003934.2Link to Protein Sequence:NP_003925.1Re-query CCDS DB by Nucleotide ID:NM_003934Re-query CCDS DB by Protein ID:NP_003925Link to BLAST:NP_003925.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003925.1 572 Q96I24-1 572 100% 0 0

Chromosomal Locations for CCDS 43893.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 130579681 130579764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130595483 130595588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130609954 130609987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130612456 130612505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130612956 130613027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130614288 130614345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130616355 130616517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130617797 130617895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130620354 130620458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130622708 130622810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130623611 130623711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130626364 130626505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130630628 130630788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130631557 130631630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130631942 130632022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130632202 130632278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130634667 130634738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130635999 130636126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 130637014 130637022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGGCGGAGCTGGTGCAGGGGCAGAGCGCTCCTGTGGGGATGAAGGCCGAGGGCTTCGTGGATGCCCTGC
ACCGGGTCCGGCAGATTGCTGCTAAAATTGATTCAATTCCTCACTTGAATAATTCCACACCTCTAGTGGA
CCCCTCAGTATATGGATACGGAGTACAAAAACGGCCCTTGGATGATGGAGTAGGTAACCAGTTAGGGGCC
TTGGTACATCAAAGGACGGTAATAACGGAAGAATTCAAAGTGCCTGACAAAATGGTTGGATTTATTATCG
GCAGGGGAGGTGAGCAGATTTCACGGATTCAAGCAGAATCTGGTTGCAAAATTCAGATTGCTTCAGAGAG
TTCTGGGATTCCAGAGAGGCCCTGTGTACTTACCGGAACCCCAGAAAGTATTGAACAAGCCAAACGGCTC
CTGGGACAGATTGTGGACCGCTGTCGAAATGGACCTGGCTTTCATAATGACATAGACAGCAACAGCACAA
TCCAGGAGATTCTCATTCCCGCATCTAAAGTGGGTCTGGTCATCGGCAGAGGAGGGGAAACAATCAAGCA
GTTGCAGGAGCGGACAGGGGTGAAGATGGTCATGATCCAGGATGGCCCATTGCCCACGGGAGCAGACAAG
CCTCTTCGTATCACTGGAGATGCATTTAAAGTACAGCAAGCAAGAGAAATGGTACTAGAGATTATCCGAG
AAAAAGACCAAGCTGACTTTCGGGGTGTACGCGGCGATTTCAACTCTCGAATGGGAGGAGGCAGTATAGA
GGTATCTGTGCCTAGGTTTGCTGTGGGGATTGTAATAGGAAGAAACGGGGAAATGATCAAAAAGATCCAG
AATGATGCTGGTGTGAGGATTCAGTTTAAACCAGATGATGGGATTAGTCCAGAAAGAGCTGCCCAGGTCA
TGGGCCCTCCGGATCGGTGTCAGCATGCAGCGCATATCATCAGCGAGCTGATTCTTACAGCCCAGGAAAG
AGACGGCTTTGGAGGCCTGGCAGCAGCCAGAGGAAGAGGTCGTGGCCGTGGCGACTGGAGCGTGGGAGCC
CCTGGTGGCGTCCAGGAGATAACATACACGGTGCCAGCCGATAAGTGTGGCCTCGTCATAGGCAAAGGGG
GTGAGAACATCAAAAGCATCAACCAGCAGTCAGGGGCGCACGTGGAGCTTCAGAGGAACCCCCCTCCCAA
CAGCGACCCCAACCTGCGGAGATTCACCATCAGGGGGGTTCCCCAGCAGATCGAGGTGGCCAGGCAGCTC
ATAGATGAGAAAGTTGGCGGGACCAATCTCGGAGCACCTGGAGCCTTCGGACAGAGTCCATTCAGCCAGC
CACCTGCCCCACCTCATCAAAATACCTTTCCTCCAAGGAGCTCCGGGTGCTTCCCAAACATGGCTGCCAA
GGTGAATGGGAACCCCCACAGCACCCCTGTGAGTGGTCCTCCGGCCTTTCTGACCCAGGGCTGGGGCAGC
ACCTACCAGGCGTGGCAGCAGCCCACACAGCAGGTCCCAAGCCAGCAGAGCCAGCCGCAGAGCAGCCAGC
CCAACTACAGCAAGGCCTGGGAAGACTATTACAAAAAACAGAGTCACGCCGCCAGCGCTGCTCCTCAGGC
CAGCTCCCCACCGGACTACACAATGGCCTGGGCAGAATATTACAGACAGCAGGTCGCTTTCTACGGACAG
ACGTTAGGGCAGGCGCAGGCCCACAGCCAGGAGCAGTAG

Translation (572 aa):
MAELVQGQSAPVGMKAEGFVDALHRVRQIAAKIDSIPHLNNSTPLVDPSVYGYGVQKRPLDDGVGNQLGA
LVHQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRL
LGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADK
PLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQ
NDAGVRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVGA
PGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFTIRGVPQQIEVARQL
IDEKVGGTNLGAPGAFGQSPFSQPPAPPHQNTFPPRSSGCFPNMAAKVNGNPHSTPVSGPPAFLTQGWGS
TYQAWQQPTQQVPSQQSQPQSSQPNYSKAWEDYYKKQSHAASAAPQASSPPDYTMAWAEYYRQQVAFYGQ
TLGQAQAHSQEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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