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Report for CCDS43995.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43995.1 Public Homo sapiens X STK26 24 110 108 CCDS HistoryNCBI Gene:51765Re-query CCDS DB by CCDS ID:43995.1Re-query CCDS DB by GeneID:51765See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43995.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000496850.1 ENSP00000419702.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000496850.1Link to Ensembl Protein Viewer:ENSP00000419702.1Re-query CCDS DB by Nucleotide ID:ENST00000496850Re-query CCDS DB by Protein ID:ENSP00000419702
Original member Current member NCBI NM_001042452.2 NP_001035917.1 Accepted alive Link to Nucleotide Sequence:NM_001042452.2Link to Protein Sequence:NP_001035917.1Re-query CCDS DB by Nucleotide ID:NM_001042452Re-query CCDS DB by Protein ID:NP_001035917Link to BLAST:NP_001035917.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001035917.1 354 Q9P289-3 354 100% 0 0

Chromosomal Locations for CCDS 43995.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 132023618 132023659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132054631 132054861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132063433 132063489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132068215 132068323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132068412 132068569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132071069 132071217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132072268 132072361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132072813 132072875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132072957 132073093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 132074135 132074159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGCCCACTCGCCGGTGGCTGTCCAAGTGCCTGGGATGCAGAATAACATAGCTGATCCAGAAGAACTGT
TCACAAAATTAGAGCGCATTGGGAAAGGCTCATTTGGGGAAGTTTTCAAAGGAATTGATAACCGTACCCA
GCAAGTCGTTGCTATTAAAATCATAGACCTTGAGGAAGCCGAAGATGAAATAGAAGACATTCAGCAAGAA
ATAACTGTCTTGAGTCAATGTGACAGCTCATATGTAACAAAATACTATGGGTCATATTTAAAGGGGTCTA
AATTATGGATAATAATGGAATACCTGGGCGGTGGTTCAGCACTGGATCTTCTTCGAGCTGGTCCATTTGA
TGAGTTCCAGATTGCTACCATGCTAAAGGAAATTTTAAAAGGTCTGGACTATCTGCATTCAGAAAAGAAA
ATTCACCGAGACATAAAAGCTGCCAATGTCTTGCTCTCAGAACAAGGAGATGTTAAACTTGCTGATTTTG
GAGTTGCTGGTCAGCTGACAGATACACAGATTAAAAGAAATACCTTTGTGGGAACTCCATTTTGGATGGC
TCCTGAAGTTATTCAACAGTCAGCTTATGACTCAAAACGTCCTACAGCAAAAGAACTTCTGAAACACAAA
TTCATTGTAAAAAATTCAAAGAAGACTTCTTATCTGACTGAACTGATAGATCGTTTTAAGAGATGGAAGG
CAGAAGGACACAGTGATGATGAATCTGATTCCGAGGGCTCTGATTCGGAATCTACCAGCAGGGAAAACAA
TACTCATCCTGAATGGAGCTTTACCACCGTACGAAAGAAGCCTGATCCAAAGAAAGTACAGAATGGGGCA
GAGCAAGATCTTGTGCAAACCCTGAGTTGTTTGTCTATGATAATCACACCTGCATTTGCTGAACTTAAAC
AGCAGGACGAGAATAACGCTAGCAGGAATCAGGCGATTGAAGAACTCGAGAAAAGTATTGCTGTGGCTGA
AGCCGCCTGTCCCGGCATCACAGATAAAATGGTGAAGAAACTAATTGAAAAATTTCAAAAGTGTTCAGCA
GACGAATCCCCCTAA

Translation (354 aa):
MAHSPVAVQVPGMQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE
ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK
IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKRPTAKELLKHK
FIVKNSKKTSYLTELIDRFKRWKAEGHSDDESDSEGSDSESTSRENNTHPEWSFTTVRKKPDPKKVQNGA
EQDLVQTLSCLSMIITPAFAELKQQDENNASRNQAIEELEKSIAVAEAACPGITDKMVKKLIEKFQKCSA
DESP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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