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Report for CCDS46361.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46361.1 Public Homo sapiens 2 KANSL3 24 110 108 CCDS HistoryNCBI Gene:55683Re-query CCDS DB by CCDS ID:46361.1Re-query CCDS DB by GeneID:55683See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46361.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431828.6 ENSP00000396749.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000431828.6Link to Ensembl Protein Viewer:ENSP00000396749.1Re-query CCDS DB by Nucleotide ID:ENST00000431828Re-query CCDS DB by Protein ID:ENSP00000396749
Original member Current member NCBI NM_001115016.3 NP_001108488.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001115016.3Link to Protein Sequence:NP_001108488.1Re-query CCDS DB by Nucleotide ID:NM_001115016Re-query CCDS DB by Protein ID:NP_001108488Link to BLAST:NP_001108488.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001108488.1 878 Q9P2N6-3 878 100% 0 0

Chromosomal Locations for CCDS 46361.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 96595611 96595631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96601643 96601776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96602116 96602338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96602753 96602862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96604250 96604380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96604779 96604863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96605320 96605511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96608508 96608664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96608864 96609064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96609499 96609562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96610726 96610883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96611064 96611138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96612282 96612353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96612462 96612563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96612818 96612934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96613488 96613619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96619359 96619544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96619672 96619762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96631312 96631482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 96636921 96637135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2637 nt):
ATGGCCCACCGGGGTGGGGAGAGGGACTTCCAGACTTCAGCTCGACGCATGGGCACCTCGCTGCTCTTCC
AGCTTTCAGTGCATGAACGGGAGCTGGACCTGGTTTTTCTGGATCATAGCTATGCCAAGCCTTGGAGTGC
CCACCCAGATGCCAGTAGTGCCCGCCCCACCCGCATGCTCTTTGTCACTCCCCGGCGGCAGCACGAAAGT
ACCATTGAATCAGACGTCCCAATAGATGTGGAGACGGTCACATCAACGCCTATGCCACTCTATGACAATC
AGAAGGCACGCAGCGTGATGAATGAGTGTGAACGGCATGTCATCTTTGCCAGGACTGATGCAGATGCCCC
TCCTCCACCAGAGGACTGGGAGGAGCATGTCAACAGGACTGGCTGGACAATGGCCCAGAACAAGCTATTC
AACAAGATCCTCAAAGCCCTGCAGTCTGACCGGCTTGCCCGCTTGGCCAACGAAGGGGCTTGTAATGAGC
CAGTGCTGCGCCGTGTTGCTGTGGACAAGTGTGCAAGGAGAGTGCGGCAGGCTCTGGCAAGTGTGAGCTG
GGATACCAAGCTGATCCAGTGGCTGCACACCACCCTTGTGGAGACCTTGAGTCTGCCCATGCTGGCAGCC
TACCTGGATGCTTTGCAGACGCTGAAGGGGAAGATCCCAACCTTGATTGACCGGATGCTTGTGTCATCCA
ACACAAAGACTGGGGCTGCAGGAGCTGAGGCCTTGTCTCTCCTACTGAAGAGGCCCTGGGACCCTGCTGT
GGGTGTGCTTTCTCATAACAAACCAAGCAAACTCCCTGGCTCTCCGCTGATTCTCATCGCCTCCTCTGGT
CCCTCCAGCTCTGTGTTTCCCACTTCACGCCGCCACCGCTTCTGGCAATCTCAGCTGTCCTGCTTGGGCA
AGGTCATCCCTGTAGCCACCCATCTGCTGAACAATGGCAGTGGGGTAGGAGTTCTACAGTGTCTCGAGCA
TATGATTGGGGCAGTGAGAAGCAAAGTGCTGGAGATTCACAGCCATTTCCCACACAAACCCATTATCTTG
ATTGGCTGGAACACAGGAGCTTTGGTGGCCTGTCATGTGTCAGTAATGGAGTATGTCACTGCAGTTGTCT
GCCTTGGGTTTCCTCTGCTTACTGTGGATGGCCCCAGAGGGGATGTAGATGATCCCCTCTTGGATATGAA
GACTCCAGTCCTCTTTGTCATTGGTCAGAATTCCCTTCAATGTCACCCTGAAGCCATGGAGGACTTCCGG
GAGAAGATTCGAGCTGAGAACAGCTTGGTGGTGGTTGGGGGAGCTGATGACAATCTCAGAATAAGCAAAG
CAAAGAAGAAATCAGAAGGGTTGACTCAGAGCATGGTGGACAGATGTATTCAGGATGAGATTGTGGACTT
TCTGACTGGAGTGCTCACTCGTGCTGAGGGTCACATGGGCTCTGAACCTCGGGATCAGGATGCTGAGAAG
AAGAAGAAGCCCCGCGATGTGGCCCGCAGAGACTTGGCCTTTGAAGTCCCTGAGCGGGGCAGTCGACCTG
CCTCCCCAGCTGCCAAGCTGCCCGCCTCACCCTCAGGCTCAGAGGATCTCTCCAGTGTGTCCAGCAGCCC
CACCTCCAGTCCCAAGACCAAAGTGACCACAGTGACCTCTGCCCAGAAGTCCAGTCAGATTGGAAGTTCT
CAGCTGCTGAAGAGACATGTGCAGCGGACAGAAGCTGTGCTGACCCACAAACAAGCTCAAGTTCCCATTT
CATCAGAACCACCAGAGGAAGGAGAGAAAGAGGATCTTAGGGTTCAGCTGAAGCGACACCATCCCTCGAG
TCCCCTTCCTGGCAGTAAGACCTCCAAACGACCGAAGATCAAGGTGTCCCTTATCTCCCAAGGGGACACA
GCTGGAGGGCCTTGTGCTCCTTCCCAAGGAAGTGCTCCAGAAGCTGCAGGTGGGAAGCCCATCACCATGA
CACTGGGGCAGGCTTCAGCAGGGGCCAAGGAGCTCACAGGACTTCTCACCACAGCCAAGTCCAGTTCTTC
TGAAGGTGGAGTCTCAGCCAGCCCAGTCCCTTCAGTGGTCTCCAGCAGCACTGCACCCAGTGCCTTGCAC
ACACTGCAGAGCCGCCTGGTGGCCACATCTCCTGGCAGCTCCCTCCCAGGGGCCACATCAGCCAGCAGCC
TCCTCCAAGGCCTCAGCTTCAGCTTGCAGGATATCAGCAGCAAGACCTCTGGCCTTCCAGCAAATCCCTC
CCCAGGACCAGCCCCACAGGCCACCAGTGTGAAGTTGCCCACCCCCATGCAGAGCCTGGGTGCCATCACC
ACGGGCACCAGCACCATTGTCCGTACCATTCCTGTGGCCACCACTCTCTCCTCCTTGGGTGCCACTCCTG
GTGGGAAGCCCACAGCCATCCACCAGCTGCTGACCAATGGGGGCCTCGCTAAGTTGGCAAGCAGCCTCCC
TGGCCTGGCTCAGATCTCTAACCAAGCATCAGGCTTGAAGGTCCCCACCACCATTACTCTGACACTTCGT
GGCCAGCCGAGCAGGATCACTACACTGAGCCCTATGGGCTCAGGAGCAGCCCCATCCGAGGAGTCCTCTT
CCCAGGTGCTGCCCTCCAGCTCACAGCGCCTGCCTCCAGCACCCTGA

Translation (878 aa):
MAHRGGERDFQTSARRMGTSLLFQLSVHERELDLVFLDHSYAKPWSAHPDASSARPTRMLFVTPRRQHES
TIESDVPIDVETVTSTPMPLYDNQKARSVMNECERHVIFARTDADAPPPPEDWEEHVNRTGWTMAQNKLF
NKILKALQSDRLARLANEGACNEPVLRRVAVDKCARRVRQALASVSWDTKLIQWLHTTLVETLSLPMLAA
YLDALQTLKGKIPTLIDRMLVSSNTKTGAAGAEALSLLLKRPWDPAVGVLSHNKPSKLPGSPLILIASSG
PSSSVFPTSRRHRFWQSQLSCLGKVIPVATHLLNNGSGVGVLQCLEHMIGAVRSKVLEIHSHFPHKPIIL
IGWNTGALVACHVSVMEYVTAVVCLGFPLLTVDGPRGDVDDPLLDMKTPVLFVIGQNSLQCHPEAMEDFR
EKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQDEIVDFLTGVLTRAEGHMGSEPRDQDAEK
KKKPRDVARRDLAFEVPERGSRPASPAAKLPASPSGSEDLSSVSSSPTSSPKTKVTTVTSAQKSSQIGSS
QLLKRHVQRTEAVLTHKQAQVPISSEPPEEGEKEDLRVQLKRHHPSSPLPGSKTSKRPKIKVSLISQGDT
AGGPCAPSQGSAPEAAGGKPITMTLGQASAGAKELTGLLTTAKSSSSEGGVSASPVPSVVSSSTAPSALH
TLQSRLVATSPGSSLPGATSASSLLQGLSFSLQDISSKTSGLPANPSPGPAPQATSVKLPTPMQSLGAIT
TGTSTIVRTIPVATTLSSLGATPGGKPTAIHQLLTNGGLAKLASSLPGLAQISNQASGLKVPTTITLTLR
GQPSRITTLSPMGSGAAPSEESSSQVLPSSSQRLPPAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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