NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS47014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47014.1 Public Homo sapiens 4 ABLIM2 24 110 108 CCDS HistoryNCBI Gene:84448Re-query CCDS DB by CCDS ID:47014.1Re-query CCDS DB by GeneID:84448See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47014.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447017.7 ENSP00000393511.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000447017.7Link to Ensembl Protein Viewer:ENSP00000393511.2Re-query CCDS DB by Nucleotide ID:ENST00000447017Re-query CCDS DB by Protein ID:ENSP00000393511
Original member Current member NCBI NM_001130083.2 NP_001123555.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130083.2Link to Protein Sequence:NP_001123555.1Re-query CCDS DB by Nucleotide ID:NM_001130083Re-query CCDS DB by Protein ID:NP_001123555Link to BLAST:NP_001123555.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123555.1 645 Q6H8Q1-9 645 100% 0 0

Chromosomal Locations for CCDS 47014.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 7966990 7967103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7983264 7983344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7983547 7983554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7984839 7984893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 7992866 7992927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8008059 8008200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8009050 8009102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8019618 8019671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8020202 8020303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8027759 8027857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8029656 8029776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8036149 8036295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8045164 8045241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8054188 8054246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8060967 8061054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8077628 8077721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8080676 8080802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8088169 8088284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8097099 8097282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8106494 8106637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 8158680 8158689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1938 nt):
ATGAGTGCAGTGTCGCAGCCCCAGGCTGCTCCCAGCCCGCTGGAGAAGTCGCCCAGCACGGCGATCCTGT
GCAACACGTGTGGGAATGTGTGCAAGGGCGAGGTGCTGCGGGTGCAGGACAAGTACTTCCACATCAAGTG
CTTCGTCTGTAAAGCATGTGGCTGCGACCTGGCCGAGGGCGGCTTCTTCGTGCGGCAGGGCGAGTACATC
TGCACGCTGGACTACCAGAGGCTCTACGGCACCCGCTGCTTCAGCTGCGACCAGTTCATTGAGGGTGAGG
TGGTGTCGGCGCTGGGCAAGACCTACCACCCCGACTGCTTCGTGTGTGCCGTCTGCCGGCTGCCCTTCCC
CCCCGGGGACCGAGTGACCTTCAACGGGAAGGAATGCATGTGCCAGAAGTGTTCCCTGCCCGTATCGGTG
GGCAGCAGCGCGCACCTGTCCCAGGGCCTCCGAAGTTGTGGGGGCTGCGGCACAGAAATCAAGAATGGCC
AGGCCCTGGTAGCCTTGGACAAGCACTGGCACTTGGGCTGTTTTAAGTGCAAGAGCTGTGGGAAGCTCCT
GAATGCCGAGTACATCAGCAAGGATGGGCTGCCCTACTGCGAAGCTGACTATCACGCCAAGTTCGGCATC
CGCTGTGACAGCTGTGAGAAATACATCACGGGGCGCGTGCTGGAGGCCGGAGAGAAGCACTACCACCCTT
CCTGCGCGCTATGTGTCAGGTGCGGCCAGATGTTTGCAGAAGGCGAAGAGATGTATCTTCAAGGTTCCTC
CATCTGGCATCCGGCGTGTCGACAAGCAGCCAGAACTGAAGACAGAAACAAGGAAACCAGAACTTCCTCA
GAGAGCATCATTTCTGTCCCTGCTTCCAGCACCTCAGGGTCTCCGAGCCGTGTGATTTATGCCAAGCTTG
GTGGTGAGATCCTGGACTACAGGGACTTGGCAGCCCTTCCTAAAAGTAAGGCCATCTATGACATCGACCG
CCCCGACATGATCTCCTACTCACCCTACATCAGCCACTCTGCAGGGGACAGGCAGAGCTACGGCGAGGGG
GATCAGGATGACCGGTCCTACAAGCAGTGTCGGACCTCCAGCCCAAGCTCCACTGGGTCGGTTAGCCTCG
GGCGCTACACTCCGACCTCACGGTCACCACAGCACTACAGCCGTCCAGCTGGTACTGTGAGTGTGGGTAC
CAGTAGCTGCCTCTCCCTGTCCCAACACCCAAGCCCTACATCCGTGTTCAGACATCATTACATCCCCTAC
TTCCGAGGCAGTGAAAGTGGCCGGAGCACCCCCAGCCTCTCCGTGCTCTCTGACAGCAAGCCGCCCCCCT
CCACCTACCAGCAGGCACCTCGCCACTTCCACGTCCCAGACACTGGCGTAAAAGATAACATCTATAGGAA
ACCCCCTATCTACAGACAGCATGCTGCCAGGCGATCGGATGGGGAGGATGGAAGCTTGGACCAGGATAAC
AGGAAGCAGAAGAGCAGCTGGCTGATGCTCAAGGGGGATGCAGACACAAGGACCAATTCTCCAGACCTGG
ACACCCAGTCCTTGTCCCACAGCAGCGGGACCGACAGAGACCCTCTCCAAAGGATGGCAGGGGACAGCTT
TCACTCACGATTCCCCTATTCCAAATCTGACCCTCTCCCAGGACATGGAAAGAATGGCTTGGACCAGCGG
AATGCCAATCTGGCCCCCTGTGGAGCAGACCCGGATGCCAGCTGGGGCATGCGAGAATACAAGATCTATC
CGTATGACTCCCTCATCGTCACAAACCGAATTCGCGTGAAACTGCCCAAAGACGTGGACCGGACGAGACT
GGAGAGACACTTGTCGCCCGAGGAGTTCCAGGAAGTGTTTGGGATGAGCATCGAGGAGTTTGACCGCCTG
GCCCTCTGGAAGAGGAATGACCTTAAGAAGAAAGCCCTTTTGTTCTGA

Translation (645 aa):
MSAVSQPQAAPSPLEKSPSTAILCNTCGNVCKGEVLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYI
CTLDYQRLYGTRCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSLPVSV
GSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAEYISKDGLPYCEADYHAKFGI
RCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQGSSIWHPACRQAARTEDRNKETRTSS
ESIISVPASSTSGSPSRVIYAKLGGEILDYRDLAALPKSKAIYDIDRPDMISYSPYISHSAGDRQSYGEG
DQDDRSYKQCRTSSPSSTGSVSLGRYTPTSRSPQHYSRPAGTVSVGTSSCLSLSQHPSPTSVFRHHYIPY
FRGSESGRSTPSLSVLSDSKPPPSTYQQAPRHFHVPDTGVKDNIYRKPPIYRQHAARRSDGEDGSLDQDN
RKQKSSWLMLKGDADTRTNSPDLDTQSLSHSSGTDRDPLQRMAGDSFHSRFPYSKSDPLPGHGKNGLDQR
NANLAPCGADPDASWGMREYKIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRL
ALWKRNDLKKKALLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH