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Report for CCDS49589.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49589.1 Public Mus musculus 15 Ankrd33b 23 108 98 CCDS HistoryNCBI Gene:67434Re-query CCDS DB by CCDS ID:49589.1Re-query CCDS DB by GeneID:67434See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49589.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000123325.8 ENSMUSP00000118984.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000123325.8Link to Ensembl Protein Viewer:ENSMUSP00000118984.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000123325Re-query CCDS DB by Protein ID:ENSMUSP00000118984
Original member Current member NCBI NM_001164441.1 NP_001157913.1 Accepted alive Link to Nucleotide Sequence:NM_001164441.1Link to Protein Sequence:NP_001157913.1Re-query CCDS DB by Nucleotide ID:NM_001164441Re-query CCDS DB by Protein ID:NP_001157913Link to BLAST:NP_001157913.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157913.1 486 Q3U0L2-1 486 100% 0 0

Chromosomal Locations for CCDS 49589.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 31297149 31297984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31304992 31305132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31325086 31325215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 31367039 31367392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGGTGCTGCTGGCTGGGCCCGGGCCGGAGGGCGGCGGGACACGCTGCTTGTCCCCGCAGTCGCCGACGC
CACCCCGTAGCGAGCAGACAGGAGAAGACCCAGCGGACTACGAGGAGTACGAAGACTTCTCTAGTCTGCC
GGACACCCGCAGCATCGCATCGGACGATTCCTTCTACCCTCCCGGAGGCGAGGAAGAGTACGGCTCGGTG
AGCGCGGAGAGCGTCCCGGAGGGCGTCCCTGAGGCGGCGACCCTCCTGCGCGCCGCCTGCGCCAACGACG
TGGGGTTGCTGCGGGCGCTAGTGCGGCGCGGGCCGAGTTCCGAGGAGGTACGGGAGACTGACCGCAACGG
CCGGACTGGCCTTATTGTTGCGTGCTACCATGGCTTTGTGGATACCGTGGTGGCCTTAGCAGAGTGTCCC
CACGTTGACGTCAACTGGCAGGACAGCGAAGGGAACACAGCCCTGATCACTGCTGCACAGGCAGGGCATG
TCACCATCACCAACTACTTGCTGAATTATTTCCCTGGTCTGGACCTAGAAAGGAGGAACATATTTGGATT
CACGGCCCTCATGAAAGCGGCCATGCAGGGCAGAACGGAATGTGTGCGAGCCCTTATGATGGCAGGGGCA
GATGTTCAAGCAAGGGATCCCCGTCGTGGGCTGTCACCACAGGAGTGGGCTGCGTACACAGGCCGAGCGG
AGGCTGTTCGCGTCATTCAGAGGCTGATGGAGCGACCCTGTCCAGAGCAGTTTGGGGACAAGTACAAGCT
GGAATTGCCACTTCCCGCTGAGGCGGTTTTGAAGAAGTCAGGTTCCAAAAACTGCTTGCAGAGATTCACC
GCGTTCCTGCGGTCCACTCTGACCTCTCGCTCCTCAGGCCAGAGCCTGGAGGATGGGGGCGTCCTTGATC
ACATGGTCAGGATGACCACGAGCCTCTACAGTCCCGCTGTTGCTGTAGTCTGTCAGACAGTGTGCCCTGA
GAACCCTCCCTGTGTGGGGAAACGACGCTTGGCGGTGCAGGAAATCCTAGCAGCTAGGGGCAACCTGAAC
GCCCAAGCGCAGGACAGCAACAAGGTAGAGTGCTCTGAGCCACAATCCCAGATTTTGGAGACTCCCAGAG
CTAGCTCCCGGTCTCCCAAGTCGCCCGCGGCATCGAGGTCCACTCCTGCCCCTGTCACTCGGAAGGCCAG
CCTCCTGCCTTTGCAGTTGCTTCGGAGAAGCAGCGTGCGGCCGGGCGTGGTAGTCCCCAGAGTGCGCATC
AGCAAGGCACCTGCGCCCACCTTCCAGCCAGAGCGCGCAGCGTCCAAGGGCAACACCAAGGACAGCATCT
ACCTGCAGATCCCCAAGTGGCGGTACAAGGAGGCCAAGGAGGAGAAGAGGAAGGCAGAGGAGGCGGAGAA
GAAGCGCCAGGCAGAGGCTCAGAAAGAAAAGCGGGCGCCACGATGGAGGAAAAGGACGTGA

Translation (486 aa):
MVLLAGPGPEGGGTRCLSPQSPTPPRSEQTGEDPADYEEYEDFSSLPDTRSIASDDSFYPPGGEEEYGSV
SAESVPEGVPEAATLLRAACANDVGLLRALVRRGPSSEEVRETDRNGRTGLIVACYHGFVDTVVALAECP
HVDVNWQDSEGNTALITAAQAGHVTITNYLLNYFPGLDLERRNIFGFTALMKAAMQGRTECVRALMMAGA
DVQARDPRRGLSPQEWAAYTGRAEAVRVIQRLMERPCPEQFGDKYKLELPLPAEAVLKKSGSKNCLQRFT
AFLRSTLTSRSSGQSLEDGGVLDHMVRMTTSLYSPAVAVVCQTVCPENPPCVGKRRLAVQEILAARGNLN
AQAQDSNKVECSEPQSQILETPRASSRSPKSPAASRSTPAPVTRKASLLPLQLLRRSSVRPGVVVPRVRI
SKAPAPTFQPERAASKGNTKDSIYLQIPKWRYKEAKEEKRKAEEAEKKRQAEAQKEKRAPRWRKRT


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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