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Report for CCDS50456.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50456.1 Public Mus musculus 19 Wbp1l 23 108 98 CCDS HistoryNCBI Gene:226178Re-query CCDS DB by CCDS ID:50456.1Re-query CCDS DB by GeneID:226178See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50456.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099376.10 ENSMUSP00000096975.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099376.10Link to Ensembl Protein Viewer:ENSMUSP00000096975.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000099376Re-query CCDS DB by Protein ID:ENSMUSP00000096975
Original member Current member NCBI NM_001177812.1 NP_001171283.1 Accepted alive Link to Nucleotide Sequence:NM_001177812.1Link to Protein Sequence:NP_001171283.1Re-query CCDS DB by Nucleotide ID:NM_001177812Re-query CCDS DB by Protein ID:NP_001171283Link to BLAST:NP_001171283.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171283.1 385 Q8BGW2-4 385 100% 0 0

Chromosomal Locations for CCDS 50456.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 46599204 46599293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46606712 46606759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46644353 46644455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46652474 46652635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 46653965 46654719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1158 nt):
ATGGAGAGGAGAAGGCTCCTGGGTGGCATGGCGCTCCTGCTCCTCCAGGCGCTGCCCAGCCCCCTGTCAG
TGAGGGCTGAGCCCCCGCAGGTGCGCTTGAGAAGTCAGAAGACAGTGGGACTGGTTCGGGCCTACCAGGA
TAAGGAAGCCTGTGTGGGTACCAACAATCAAAGCTACATCTGTGACACAGGACACTGCTGTGGACAGTCT
CAGTGCTGCAACTACTACTATGAACTCTGGTGGTTCTGGCTGGTGTGGACCGTCGTCATCATTCTGAGCT
GCTGCTGTGTCTGCCACCACCGCCGAGCCAAGCACCGCCTTCAGGCTCAGCAGCGGCAACATGAAATCAA
CCTGATCGCTTACCGGGAAGCCCACAACTACTCAGCGTTGCCGTTTTACTTCAGGTTTTTGCCAAACTCT
TTGCTACCTCCTTATGAGGAAGTGGTGAACCGACCTCCAACTCCTCCCCCACCGTACAGTGCCTTCCAGC
TCCAACAGCAGCAGCAGCTGCTGCCACCTCCTCCTCAGGGTGGCCCTCCAGGTGGCAGCCCCCCAGGCGC
TGACCCGCCGCCCCAGGGCTCCCAGGGAGCGCAGAGCAGTCCTTTGTCCGGACCGAGCCGAAGCAGCACA
AGACCTCCAAGTGTCGCAGATCCTCAGTCCCCTGAAGTGCCCACTGACCGGGAAGCCACCAAAGCCTCTG
GGACGGAGTCTGGTAGCCCCATGGCCGGCCACGGGGAGCTGGACCCGGGCGCCTTCCTGGACCAGGATTC
CGAGTGCAAGGAGGAGCTACTGAAAGATTCGCGTTCTGAGCGTGGCGGCGTGTCCCCTGACAGTGAAGAC
AAGACCCCCGGCAGGCATCGCCGCTTCACAGGTGACTCAGGCATTGAGGTGTGTGTGTGCAACCGGGGCC
ACCATGACGATGACCTCAAAGAGTTTAACACGCTCATAGATGATGCTCTGGACGGGCCCCTGGACTTCTG
TGACAGCTGTCATGTACGGCCTCCTGTTGATGAAGAGGAAGGTCTCTGCCTGTCCTCGGAGGGTCAGGCT
CGGGAGCATGGGCACCCCCACCTGCCACGGCCGCCTGCGTGTCTGCTGCTAAACACCATCAATGAGCAGG
ACTCTCCAAATTCCCAGCACAGTGGCTCCCCGAGCTAG

Translation (385 aa):
MERRRLLGGMALLLLQALPSPLSVRAEPPQVRLRSQKTVGLVRAYQDKEACVGTNNQSYICDTGHCCGQS
QCCNYYYELWWFWLVWTVVIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYSALPFYFRFLPNS
LLPPYEEVVNRPPTPPPPYSAFQLQQQQQLLPPPPQGGPPGGSPPGADPPPQGSQGAQSSPLSGPSRSST
RPPSVADPQSPEVPTDREATKASGTESGSPMAGHGELDPGAFLDQDSECKEELLKDSRSERGGVSPDSED
KTPGRHRRFTGDSGIEVCVCNRGHHDDDLKEFNTLIDDALDGPLDFCDSCHVRPPVDEEEGLCLSSEGQA
REHGHPHLPRPPACLLLNTINEQDSPNSQHSGSPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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