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Report for CCDS51801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51801.1 Public Mus musculus 6 4930544G11Rik 23 108 98 CCDS HistoryNCBI Gene:67653Re-query CCDS DB by CCDS ID:51801.1Re-query CCDS DB by GeneID:67653See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51801.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043382.8 ENSMUSP00000045487.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043382.8Link to Ensembl Protein Viewer:ENSMUSP00000045487.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000043382Re-query CCDS DB by Protein ID:ENSMUSP00000045487
Original member Current member NCBI NM_001161773.1 NP_001155245.1 Accepted alive Link to Nucleotide Sequence:NM_001161773.1Link to Protein Sequence:NP_001155245.1Re-query CCDS DB by Nucleotide ID:NM_001161773Re-query CCDS DB by Protein ID:NP_001155245Link to BLAST:NP_001155245.1

Chromosomal Locations for CCDS 51801.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 65952783 65953364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGGCTGCCATCCGGAAGAAACTGGTGATCGTGGGAGATGGAGCTTGTGGAAAAACATGTTTGCTCATCG
TCTTCAGCAAGGACCAGTTTCCTGAGGTTTACGTGCCCACAGTATTTGAGAACTATGTGGCTGATATCGA
AGTGGATGGAAAACAGGTGGAGTTGGCCCTGTGGGATACAGCTGGACAAGAAGATTATGATCGCCTGAGG
CCACTCTCCTATCCCGACACTGATGTTCTCTTGTTATGTTTCTCCATTGGCAACCCTGATAGCTTTGGGA
ACATCCCACATAAATGGATTCCAGAAGTCAAGCATTTCTGTCCCAACGTGCCCATCATCCTGGTTGGGAG
TAAGAAGGATCTTCGGAATGACTTCTACACGATACAAGAGTTAGCCAAGAGGAAGCAAGCGCCTGTGAGA
CCTGAACAAGGCCAAGGGTTGGCGAACAGCATTGGCGCTTTCGAGTATGTGGAGTGTTCAGCGAAGACCA
AAGATGGAGTGAGGAGGGTCTTTGAAAAGGCCACAAGGGCTGCTCTGCAAACGAATCGAGTGAAGAAAAA
GACTGGTTGCTTTGTCTTTTGA

Translation (193 aa):
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLR
PLSYPDTDVLLLCFSIGNPDSFGNIPHKWIPEVKHFCPNVPIILVGSKKDLRNDFYTIQELAKRKQAPVR
PEQGQGLANSIGAFEYVECSAKTKDGVRRVFEKATRAALQTNRVKKKTGCFVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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