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Report for CCDS5267.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5267.1 Public Homo sapiens 6 WTAP 24 110 108 CCDS HistoryNCBI Gene:9589Re-query CCDS DB by CCDS ID:5267.1Re-query CCDS DB by GeneID:9589See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5267.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337387.4 ENSP00000336911.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337387.4Link to Ensembl Protein Viewer:ENSP00000336911.4Re-query CCDS DB by Nucleotide ID:ENST00000337387Re-query CCDS DB by Protein ID:ENSP00000336911
Original member Current member EBI ENST00000650096.1 ENSP00000497840.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650096.1Link to Ensembl Protein Viewer:ENSP00000497840.1Re-query CCDS DB by Nucleotide ID:ENST00000650096Re-query CCDS DB by Protein ID:ENSP00000497840
Original member Current member NCBI NM_152857.3 NP_690596.1 Accepted alive Link to Nucleotide Sequence:NM_152857.3Link to Protein Sequence:NP_690596.1Re-query CCDS DB by Nucleotide ID:NM_152857Re-query CCDS DB by Protein ID:NP_690596Link to BLAST:NP_690596.1
Original member Current member NCBI NM_152858.3 NP_690597.1 Accepted alive Link to Nucleotide Sequence:NM_152858.3Link to Protein Sequence:NP_690597.1Re-query CCDS DB by Nucleotide ID:NM_152858Re-query CCDS DB by Protein ID:NP_690597Link to BLAST:NP_690597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_690596.1 151 Q15007-2 151 100% 0 0
NP_690597.1 151 Q15007-2 151 100% 0 0

Chromosomal Locations for CCDS 5267.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 159736266 159736295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159738990 159739045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159742088 159742146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159743665 159743792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159748191 159748373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGACCAACGAAGAACCTCTTCCCAAGAAGGTTCGATTGAGTGAAACAGACTTCAAAGTTATGGCAAGAG
ATGAGTTAATTCTAAGATGGAAACAATATGAAGCATATGTACAAGCTTTGGAGGGCAAGTACACAGATCT
TAACTCTAATGATGTAACTGGCCTAAGAGAGTCTGAAGAAAAACTAAAGCAACAACAGCAGGAGTCTGCA
CGCAGGGAAAACATCCTTGTAATGCGACTAGCAACCAAGGAACAAGAGATGCAAGAGTGTACTACTCAAA
TCCAGTACCTCAAGCAAGTCCAGCAGCCGAGCGTTGCCCAACTGAGATCAACAATGGTAGACCCAGCGAT
CAACTTGTTTTTCCTAAAAATGAAAGGTGAACTGGAACAGACTAAAGACAAACTGGAACAAGCCCAAAAT
GAACTGAGTGCCTGGAAGTTTACGCCTGATAGGTAA

Translation (151 aa):
MTNEEPLPKKVRLSETDFKVMARDELILRWKQYEAYVQALEGKYTDLNSNDVTGLRESEEKLKQQQQESA
RRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRSTMVDPAINLFFLKMKGELEQTKDKLEQAQN
ELSAWKFTPDR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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