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Report for CCDS53869.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53869.1 Public Homo sapiens 13 DLEU7 24 110 108 CCDS HistoryNCBI Gene:220107Re-query CCDS DB by CCDS ID:53869.1Re-query CCDS DB by GeneID:220107See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53869.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400393.3 ENSP00000420976.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400393.3Link to Ensembl Protein Viewer:ENSP00000420976.1Re-query CCDS DB by Nucleotide ID:ENST00000400393Re-query CCDS DB by Protein ID:ENSP00000420976
Original member Current member NCBI NM_198989.3 NP_945340.2 Accepted alive Link to Nucleotide Sequence:NM_198989.3Link to Protein Sequence:NP_945340.2Re-query CCDS DB by Nucleotide ID:NM_198989Re-query CCDS DB by Protein ID:NP_945340Link to BLAST:NP_945340.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_945340.2 160 Q6UYE1-2 160 100% 0 0

Chromosomal Locations for CCDS 53869.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 50713217 50713240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 50843188 50843646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (483 nt):
ATGGCCAGCCCTGCGCCCTTAGTGGCCTCCATCAGCCACCAAATGGTGGCTCTGCAGACCTTGCAGCTGC
TGCAGCAGGAGTGGGGCTGGGGGGACGGTCCAGTCGCCCCCGGGAACCCGCGGGACCCAGACCACGTGTC
CACCGCTCCAGCCCGTCGCTCAGGCCCGCCGCGGGCCCGGCCGGGGCCCGGGCGCGAGGAGCGGGGCGGG
GGCGTGGGGACCAGGAGTCGGCGGACCGCGGCGCGGGCGAACTCCCCAGAGGAGGAGGTAGTGCGAGGCG
CTGAGGGGGGCGCCGAGTTGCTGCCCTTCCCCCGGGACCGCGGGCCCTGCACCCTGGCCCAGATGGCGAT
GCGCAGCGCGCTGGCCCGCGTGGTGGACTCGACTTCGGAGCTGGTCAGCGTGGAGCAGACGCTGCTGGGG
CCCCTCCAGCAGGAGCGGTCCTTTCCCATTCACCTGAAGCTTCAACTCCTGGCTAATGAGTGA

Translation (160 aa):
MASPAPLVASISHQMVALQTLQLLQQEWGWGDGPVAPGNPRDPDHVSTAPARRSGPPRARPGPGREERGG
GVGTRSRRTAARANSPEEEVVRGAEGGAELLPFPRDRGPCTLAQMAMRSALARVVDSTSELVSVEQTLLG
PLQQERSFPIHLKLQLLANE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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