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Report for CCDS55095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55095.1 Public Homo sapiens 7 KLHL7 24 110 108 CCDS HistoryNCBI Gene:55975Re-query CCDS DB by CCDS ID:55095.1Re-query CCDS DB by GeneID:55975See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55095.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322275.9 ENSP00000323270.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000322275.9Link to Ensembl Protein Viewer:ENSP00000323270.5Re-query CCDS DB by Nucleotide ID:ENST00000322275Re-query CCDS DB by Protein ID:ENSP00000323270
Original member Current member NCBI NM_001172428.2 NP_001165899.1 Accepted alive Link to Nucleotide Sequence:NM_001172428.2Link to Protein Sequence:NP_001165899.1Re-query CCDS DB by Nucleotide ID:NM_001172428Re-query CCDS DB by Protein ID:NP_001165899Link to BLAST:NP_001165899.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001165899.1 166 Q8IXQ5-3 166 100% 0 0

Chromosomal Locations for CCDS 55095.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 23106027 23106146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23123777 23123879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23124688 23124781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23125048 23125172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 23125761 23125819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGGCAGCCTCTGGGGTGGAGAAGAGCAGCAAGAAGAAGACCGAGAAGAAACTTGCTGCTCGGGAAGAAG
CTAAATTGTTGGCGGGTTTCATGGGCGTCATGAATAACATGCGGAAACAGAAAACGTTGTGTGACGTGAT
CCTCATGGTCCAGGAAAGAAAGATACCTGCTCATCGTGTTGTTCTTGCTGCAGCCAGTCATTTTTTTAAC
TTAATGTTCACAACTAACATGCTTGAATCAAAGTCCTTTGAAGTAGAACTCAAAGATGCTGAACCTGATA
TTATTGAACAACTGGTGGAATTTGCTTATACTGCTAGAATTTCCGTGAATAGCAACAATGTTCAGTCTTT
GCTGGATGCAGCAAACCAATATCAGATTGAACCTGTGAAGAAAATGTGTGTTGATTTTTTGAAAGAACAA
GTTGATGCTTCAAATTGTCTTGGAGAAGCAGAAAAAGTTGATCAGAGCCTTCCAGAGTGTGGTATGCTTT
TCACTGTGTGA

Translation (166 aa):
MAASGVEKSSKKKTEKKLAAREEAKLLAGFMGVMNNMRKQKTLCDVILMVQERKIPAHRVVLAAASHFFN
LMFTTNMLESKSFEVELKDAEPDIIEQLVEFAYTARISVNSNNVQSLLDAANQYQIEPVKKMCVDFLKEQ
VDASNCLGEAEKVDQSLPECGMLFTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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