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Report for CCDS55131.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55131.1 Public Homo sapiens 7 ASNS 24 110 108 CCDS HistoryNCBI Gene:440Re-query CCDS DB by CCDS ID:55131.1Re-query CCDS DB by GeneID:440See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55131.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000455086.5 ENSP00000408472.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455086.5Link to Ensembl Protein Viewer:ENSP00000408472.1Re-query CCDS DB by Nucleotide ID:ENST00000455086Re-query CCDS DB by Protein ID:ENSP00000408472
Original member Current member EBI ENST00000437628.5 ENSP00000414379.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437628.5Link to Ensembl Protein Viewer:ENSP00000414379.1Re-query CCDS DB by Nucleotide ID:ENST00000437628Re-query CCDS DB by Protein ID:ENSP00000414379
Original member Current member NCBI NM_001178076.2 NP_001171547.1 Accepted alive Link to Nucleotide Sequence:NM_001178076.2Link to Protein Sequence:NP_001171547.1Re-query CCDS DB by Nucleotide ID:NM_001178076Re-query CCDS DB by Protein ID:NP_001171547Link to BLAST:NP_001171547.1
Original member Current member NCBI NM_001178077.1 NP_001171548.1 Accepted alive Link to Nucleotide Sequence:NM_001178077.1Link to Protein Sequence:NP_001171548.1Re-query CCDS DB by Nucleotide ID:NM_001178077Re-query CCDS DB by Protein ID:NP_001171548Link to BLAST:NP_001171548.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171547.1 478 P08243-3 478 100% 0 0
NP_001171548.1 478 P08243-3 478 100% 0 0

Chromosomal Locations for CCDS 55131.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 97852259 97852468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97853060 97853215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97853305 97853386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97854580 97854680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97855353 97855459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97856690 97856816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97858278 97858405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97858854 97858955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97859213 97859398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 97864259 97864496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1437 nt):
ATGCAACAGCATTTTGAATTTGAATACCAGACCAAAGTGGATGGTGAGATAATCCTTCATCTTTATGACA
AAGGAGGAATTGAGCAAACAATTTGTATGTTGGATGGTGTGTTTGCATTTGTTTTACTGGATACTGCCAA
TAAGAAAGTGTTCCTGGGTAGAGATACATATGGAGTCAGACCTTTGTTTAAAGCAATGACAGAAGATGGA
TTTTTGGCTGTATGTTCAGAAGCTAAAGGTCTTGTTACATTGAAGCACTCCGCGACTCCCTTTTTAAAAG
TGGAGCCTTTTCTTCCTGGACACTATGAAGTTTTGGATTTAAAGCCAAATGGCAAAGTTGCATCCGTGGA
AATGGTTAAATATCATCACTGTCGGGATGTACCCCTGCACGCCCTCTATGACAATGTGGAGAAACTCTTT
CCAGGTTTTGAGATAGAAACTGTGAAGAACAACCTCAGGATCCTTTTTAATAATGCTGTAAAGAAACGTT
TGATGACAGACAGAAGGATTGGCTGCCTTTTATCAGGGGGCTTGGACTCCAGCTTGGTTGCTGCCACTCT
GTTGAAGCAGCTGAAAGAAGCCCAAGTACAGTATCCTCTCCAGACATTTGCAATTGGCATGGAAGACAGC
CCCGATTTACTGGCTGCTAGAAAGGTGGCAGATCATATTGGAAGTGAACATTATGAAGTCCTTTTTAACT
CTGAGGAAGGCATTCAGGCTCTGGATGAAGTCATATTTTCCTTGGAAACTTATGACATTACAACAGTTCG
TGCTTCAGTAGGTATGTATTTAATTTCCAAGTATATTCGGAAGAACACAGATAGCGTGGTGATCTTCTCT
GGAGAAGGATCAGATGAACTTACGCAGGGTTACATATATTTTCACAAGGCTCCTTCTCCTGAAAAAGCCG
AGGAGGAGAGTGAGAGGCTTCTGAGGGAACTCTATTTGTTTGATGTTCTCCGCGCAGATCGAACTACTGC
TGCCCATGGTCTTGAACTGAGAGTCCCATTTCTAGATCATCGATTTTCTTCCTATTACTTGTCTCTGCCA
CCAGAAATGAGAATTCCAAAGAATGGGATAGAAAAACATCTCCTGAGAGAGACGTTTGAGGATTCCAATC
TGATACCCAAAGAGATTCTCTGGCGACCAAAAGAAGCCTTCAGTGATGGAATAACTTCAGTTAAGAATTC
CTGGTTTAAGATTTTACAGGAATACGTTGAACATCAGGTTGATGATGCAATGATGGCAAATGCAGCCCAG
AAATTTCCCTTCAATACTCCTAAAACCAAAGAAGGATATTACTACCGTCAAGTCTTTGAACGCCATTACC
CAGGCCGGGCTGACTGGCTGAGCCATTACTGGATGCCCAAGTGGATCAATGCCACTGACCCTTCTGCCCG
CACGCTGACCCACTACAAGTCAGCTGTCAAAGCTTAG

Translation (478 aa):
MQQHFEFEYQTKVDGEIILHLYDKGGIEQTICMLDGVFAFVLLDTANKKVFLGRDTYGVRPLFKAMTEDG
FLAVCSEAKGLVTLKHSATPFLKVEPFLPGHYEVLDLKPNGKVASVEMVKYHHCRDVPLHALYDNVEKLF
PGFEIETVKNNLRILFNNAVKKRLMTDRRIGCLLSGGLDSSLVAATLLKQLKEAQVQYPLQTFAIGMEDS
PDLLAARKVADHIGSEHYEVLFNSEEGIQALDEVIFSLETYDITTVRASVGMYLISKYIRKNTDSVVIFS
GEGSDELTQGYIYFHKAPSPEKAEEESERLLRELYLFDVLRADRTTAAHGLELRVPFLDHRFSSYYLSLP
PEMRIPKNGIEKHLLRETFEDSNLIPKEILWRPKEAFSDGITSVKNSWFKILQEYVEHQVDDAMMANAAQ
KFPFNTPKTKEGYYYRQVFERHYPGRADWLSHYWMPKWINATDPSARTLTHYKSAVKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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