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Report for CCDS55943.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55943.1 Public Homo sapiens 14 WDR20 24 110 108 CCDS HistoryNCBI Gene:91833Re-query CCDS DB by CCDS ID:55943.1Re-query CCDS DB by GeneID:91833See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55943.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454394.2 ENSP00000406084.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454394.2Link to Ensembl Protein Viewer:ENSP00000406084.2Re-query CCDS DB by Nucleotide ID:ENST00000454394Re-query CCDS DB by Protein ID:ENSP00000406084
Original member Current member NCBI NM_001242417.2 NP_001229346.1 Accepted alive Link to Nucleotide Sequence:NM_001242417.2Link to Protein Sequence:NP_001229346.1Re-query CCDS DB by Nucleotide ID:NM_001242417Re-query CCDS DB by Protein ID:NP_001229346Link to BLAST:NP_001229346.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229346.1 600 Q8TBZ3-7 600 100% 0 0

Chromosomal Locations for CCDS 55943.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 102139924 102140172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102194938 102195120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102197755 102197847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 102208603 102209880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1803 nt):
ATGGCGACGGAGGGAGGAGGGAAGGAGATGAACGAGATTAAGACCCAATTCACCACCCGGGAAGGTCTGT
ACAAGCTGCTGCCGCACTCGGAGTACAGCCGGCCCAACCGGGTGCCCTTCAACTCGCAGGGATCCAACCC
TGTCCGCGTCTCCTTCGTAAACCTCAACGACCAGTCTGGCAACGGCGACCGCCTCTGCTTCAATGTGGGC
CGGGAGCTGTACTTCTATATCTACAAGGGGGTCCGCAAGGCTGCTGACTTGAGTAAACCAATAGATAAAA
GGATATACAAAGGAACACAGCCTACTTGTCATGACTTCAACCACCTAACAGCCACAGCAGAAAGTGTCTC
TCTCCTAGTGGGCTTTTCCGCAGGCCAAGTCCAGCTTATAGACCCAATCAAAAAAGAAACTAGCAAACTT
TTTAATGAGGAAAACTCTTGTCAGCACTTGTGGAAGGTGGATTGGAATGAAGAAAGACAGAATGAAGGTA
GCAAGACCAGTGAGGAGGCTCTAGTAACTGTCCAGAGACTAATAGACAAGTCACGAGTTACCTGTGTCAA
ATGGGTTCCCGGTTCGGAAAGCCTTTTCCTAGTAGCCCACTCGAGTGGGAACATGTACTTATATAATGTG
GAGCACACTTGTGGCACCACAGCCCCCCACTACCAGCTTCTGAAGCAGGGAGAGAGCTTTGCCGTGCACA
CTTGCAAGAGCAAATCCACGAGGAACCCTCTCCTTAAGTGGACGGTGGGCGAGGGGGCCCTCAACGAGTT
TGCTTTCTCCCCAGATGGCAAGTTCTTAGCGTGCGTGAGCCAGGACGGGTTTCTGCGGGTGTTCAACTTT
GACTCAGTGGAGCTGCACGGTACGATGAAAAGCTACTTTGGGGGCTTGCTGTGTGTGTGCTGGAGCCCGG
ATGGCAAGTACATCGTGACAGGTGGGGAGGACGACTTGGTGACAGTCTGGTCCTTTGTAGACTGCCGAGT
AATAGCCAGAGGCCACGGGCACAAGTCCTGGGTCAGTGTTGTAGCGTTTGACCCTTATACCACTAGTGTA
GAAGAAGGTGACCCTATGGAGTTTAGTGGCAGCGATGAGGACTTCCAAGACCTTCTTCATTTTGGCAGAG
ATCGAGCAAATAGTACACAGTCCAGGCTCTCCAAACGGAACTCTACAGACAGCCGCCCCGTAAGTGTCAC
GTATCGGTTTGGTTCCGTGGGCCAGGACACACAGCTCTGTTTATGGGACCTTACAGAAGATATCCTTTTC
CCTCACCAACCCCTCTCAAGAGCAAGGACACACACAAATGTCATGAATGCCACGAGTCCTCCTGCTGGAA
GCAATGGGAACAGTGTTACAACACCCGGGAACTCTGTGCCGCCTCCTCTGCCACGGTCCAACAGCCTTCC
ACATTCAGCAGTCTCAAATGCTGGCAGCAAAAGCAGTGTCATGGACGGGGCCATTGCTTCTGGGGTCAGC
AAATTTGCAACACTTTCACTACATGACCGGAAGGAGAGGCACCACGAGAAAGATCACAAGCGAAATCATA
GCATGGGACACATTTCTAGCAAGAGCAGTGACAAACTGAATCTAGTTACCAAAACCAAAACGGACCCTGC
TAAAACTCTGGGAACGCCCCTGTGTCCTCGAATGGAAGATGTTCCCTTGTTAGAGCCGCTGATATGTAAA
AAGATAGCACATGAGAGACTGACTGTACTAATATTTCTTGAAGACTGTATAGTCACTGCTTGTCAGGAGG
GATTTATTTGCACATGGGGAAGGCCTGGTAAAGTGGTAAGTTTTAATCCTTAA

Translation (600 aa):
MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVG
RELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKL
FNEENSCQHLWKVDWNEERQNEGSKTSEEALVTVQRLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNV
EHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNF
DSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSV
EEGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILF
PHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVS
KFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICK
KIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVVSFNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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