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Report for CCDS58028.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58028.1 Public Homo sapiens 1 OAZ3 24 110 108 CCDS HistoryNCBI Gene:51686Re-query CCDS DB by CCDS ID:58028.1Re-query CCDS DB by GeneID:51686See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)


Attributes
Ribosomal slippage (translational frameshift)

Sequence IDs included in CCDS 58028.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321531.10 ENSP00000313922.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000321531.10Link to Ensembl Protein Viewer:ENSP00000313922.5Re-query CCDS DB by Nucleotide ID:ENST00000321531Re-query CCDS DB by Protein ID:ENSP00000313922
Original member Current member NCBI NM_001134939.1 NP_001128411.1 Accepted alive Link to Nucleotide Sequence:NM_001134939.1Link to Protein Sequence:NP_001128411.1Re-query CCDS DB by Nucleotide ID:NM_001134939Re-query CCDS DB by Protein ID:NP_001128411Link to BLAST:NP_001128411.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128411.1 190 Q9UMX2-2 190 96.8421% 0 6

Chromosomal Locations for CCDS 58028.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151763136 151763167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151767163 151767223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151767225 151767299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151768058 151768233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151770172 151770257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151771077 151771219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (573 nt):
ATGACCGTGCCCTGGCGGCCAGGAAAGCGACGCATCACTTATAAGGAAGAGGAGGACTTGACACTCCAGC
CCCGTTCCTGCCTCCAGTGCTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAA
CCACGACCAGCTTAAAGAACTGTATTCGGCTGGGAACTTGACGGTGCTGGCTACTGACCCCCTGCTCCAC
CAGGACCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTCCCAGACCTCTGCCCATTGGCACGGCCTTC
TCTGTGACCGTCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTGAC
TGCAACCCTGGAGTACGTGGAAGAGAAGACAAATGTGGACTCTGTGTTTGTGAACTTCCAGAATGATCGG
AACGACAGAGGTGCCCTGCTGCGGGCCTTCAGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTG
CCCTCCCTCCCTTGGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCCCAG
TGAGCCTCCTTGA

Translation (190 aa):
MTVPWRPGKRRITYKEEEDLTLQPRSCLQCSESLVGLQEGKSTEQGNHDQLKELYSAGNLTVLATDPLLH
QDPVQLDFHFRLTSQTSAHWHGLLCDRRLFLDIPYQALDQGNRESLTATLEYVEEKTNVDSVFVNFQNDR
NDRGALLRAFSYMGFEVVRPDHPALPPLDNVIFMVYPLERDVGHLPSEPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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