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Report for CCDS59681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59681.1 Public Mus musculus 5 Zfp932 23 108 98 CCDS HistoryNCBI Gene:69504Re-query CCDS DB by CCDS ID:59681.1Re-query CCDS DB by GeneID:69504See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59681.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000112540.7 ENSMUSP00000108159.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000112540.7Link to Ensembl Protein Viewer:ENSMUSP00000108159.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000112540Re-query CCDS DB by Protein ID:ENSMUSP00000108159
Original member Current member NCBI NM_145563.2 NP_663538.2 Accepted alive Link to Nucleotide Sequence:NM_145563.2Link to Protein Sequence:NP_663538.2Re-query CCDS DB by Nucleotide ID:NM_145563Re-query CCDS DB by Protein ID:NP_663538Link to BLAST:NP_663538.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663538.2 526 E9QAG8 526 100% 0 0

Chromosomal Locations for CCDS 59681.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 109996628 109996633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110006944 110007070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110007256 110007316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 110008632 110010018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1581 nt):
ATGGTGGATGCATTGACCTATGATGATGTGTATGTGAACTTCACTCAAGAAGAATGGGCTTTGCTGAATC
CTTCACAGAAGAGTCTCTACAAAGATGTGATGTTGGAGACCTACAGGAACCTCAATGCTGTAGGCTACAA
TTGGGAAGACAGTAATATTGAAGAACATTGTGAAAGCTCCAGAAGACATGGAAGGCATGAAAGAAATCAT
ACTGGAGAGAAACCCTACGAAGGTATTCAATATGGTGAAGCCTTTGTTCATCACAGTAGTCTACAAATGC
GTAAAATAATACATACTGGAGAGAAACGCTACAAATGCAATCAATGTGATAAAGCCTATTCACGACACAG
CATTCTACAAATACATAAAAGAACACATAGTGGAGAGAAACCCTATGAATGTAATCAATGTGGTAAAGCC
TTTACACAACACAGTCATCTCAAAATACATATGGTTACACATACTGGAGAGAAACCTTACAAATGTGATC
AATGTGGTAAAGCCTTTGCATTCCATAGTACCCTCCAAGTACATAAAAGAACACATACTGGAGAGAAACC
CTATGAATGTAATCAGTGTAGTAAAGCCTTTGCACATCATTGTCATCTCCGAGTACATAAAAGAATACAC
ACTGGAGAGAAACCTTACAAATGTGATCAATGTGGTAAAGCCTTTGTAGGTCAGAATGATCTTAAGAGAC
ATGAAAGAGTTCATACTGGAGAGAAACCTTACAAATGCAATGAATGTGGTAAAGCCTTTGTATGTAATGC
CAGTCTCCGTACACATAAAACAACACATACTGGAGTGAAACCTTATGAATGTAAGCAGTGTACTAAATCC
TTTGCCTCTCATGGTCAACTTCAAAAACATGAAAGAATTCATACTGGAGAGAAACCTTACAAATGTGATC
AGTGTGGTAAAGCCTTTGCCTCTCATGATAAATTTCAAAAACATGAAAGAATTCATATTGGAGAGAAACC
TTACAAATGTAAGCAATGTACTAAATCCTTTGCCTCTCATGATAAACTTCAAAAACATGAAAGAATTCAT
ACTGGAGAGAAACCTTATGAATGTAAGCAATGTACTAAATCCTTTGCCTCTCATAATAAACTTCAAAAAC
ATGAAAGAATTCATACTGGAGAGAAGCCTTACAAGTGTGATCAATGTAATAAAGCCTTTGTATATGAAAG
TTATTTACAAGTTCATAAAAAAACACATACTGGAGAGAAACCTTACAAATGTAATGAATGTGGTAAAGCC
TTTGCACGACACAGTCATCTCAAAGTGCATAAAATAACACATACTGGAGAGAAACCTTACAAATGTAATC
AATGTGGTAAAGCCCTTGCATATCATAGTACACTCCAAGTACATCAAAGAACACATACTGGAGAGAAGCC
CTATGAATGTGAGCAATGTGGCAAAGCCTTTGCAAATCAAAGTTATTTCCAAGTACATAAAAGAATACAT
ACTGGAGAGAAACCCTACAAATGTGATCAATGTGGTAAAGCCTTTGTAGGTTCAAGTGATCTTAAAAGAC
ATGAAAGAGTTCATACTGGGAGAGAAACCTTACAAATGTGA

Translation (526 aa):
MVDALTYDDVYVNFTQEEWALLNPSQKSLYKDVMLETYRNLNAVGYNWEDSNIEEHCESSRRHGRHERNH
TGEKPYEGIQYGEAFVHHSSLQMRKIIHTGEKRYKCNQCDKAYSRHSILQIHKRTHSGEKPYECNQCGKA
FTQHSHLKIHMVTHTGEKPYKCDQCGKAFAFHSTLQVHKRTHTGEKPYECNQCSKAFAHHCHLRVHKRIH
TGEKPYKCDQCGKAFVGQNDLKRHERVHTGEKPYKCNECGKAFVCNASLRTHKTTHTGVKPYECKQCTKS
FASHGQLQKHERIHTGEKPYKCDQCGKAFASHDKFQKHERIHIGEKPYKCKQCTKSFASHDKLQKHERIH
TGEKPYECKQCTKSFASHNKLQKHERIHTGEKPYKCDQCNKAFVYESYLQVHKKTHTGEKPYKCNECGKA
FARHSHLKVHKITHTGEKPYKCNQCGKALAYHSTLQVHQRTHTGEKPYECEQCGKAFANQSYFQVHKRIH
TGEKPYKCDQCGKAFVGSSDLKRHERVHTGRETLQM


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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