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Report for CCDS6120.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6120.1 Public Homo sapiens 8 ANK1 24 110 108 CCDS HistoryNCBI Gene:286Re-query CCDS DB by CCDS ID:6120.1Re-query CCDS DB by GeneID:286See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6120.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000348036.8 ENSP00000297744.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000348036.8Link to Ensembl Protein Viewer:ENSP00000297744.5Re-query CCDS DB by Nucleotide ID:ENST00000348036Re-query CCDS DB by Protein ID:ENSP00000297744
Original member Current member NCBI NM_020480.5 NP_065213.2 Accepted alive Link to Nucleotide Sequence:NM_020480.5Link to Protein Sequence:NP_065213.2Re-query CCDS DB by Nucleotide ID:NM_020480Re-query CCDS DB by Protein ID:NP_065213Link to BLAST:NP_065213.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065213.2 109 P16157-22 109 100% 0 0

Chromosomal Locations for CCDS 6120.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 41655727 41655753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41663659 41663742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 41664805 41665023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (330 nt):
ATGTGGACTTTCGTCACCCAGCTGTTGGTCACGCTGGTGCTGCTGAGCTTCTTCCTGGTCAGCTGTCAGA
ACGTGATGCACATTGTCAGGGGGTCCCTGTGCTTTGTGCTAAAGCACATCCACCAGGAGCTGGACAAGGA
GCTGGGGGAGAGCGAGGGCCTCAGTGACGACGAGGAGACCATCTCCACCAGGGTGGTCCGGCGGCGGGTC
TTCCTGAAGGGGAATGAGTTTCAGAATATTCCAGGGGAGCAGGTGACAGAGGAGCAATTCACGGATGAGC
AGGGCAACATTGTCACCAAGAAGGATCACACCTCGACACCCAACCCCTGA

Translation (109 aa):
MWTFVTQLLVTLVLLSFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEETISTRVVRRRV
FLKGNEFQNIPGEQVTEEQFTDEQGNIVTKKDHTSTPNP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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