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Report for CCDS64862.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
64862.1 Public Homo sapiens 8 PNOC 24 110 108 CCDS HistoryNCBI Gene:5368Re-query CCDS DB by CCDS ID:64862.1Re-query CCDS DB by GeneID:5368See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 64862.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000522209.1 ENSP00000430145.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000522209.1Link to Ensembl Protein Viewer:ENSP00000430145.1Re-query CCDS DB by Nucleotide ID:ENST00000522209Re-query CCDS DB by Protein ID:ENSP00000430145
Original member Current member NCBI NM_001284244.2 NP_001271173.1 Accepted alive Link to Nucleotide Sequence:NM_001284244.2Link to Protein Sequence:NP_001271173.1Re-query CCDS DB by Nucleotide ID:NM_001284244Re-query CCDS DB by Protein ID:NP_001271173Link to BLAST:NP_001271173.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271173.1 112 Q13519-2 112 100% 0 0

Chromosomal Locations for CCDS 64862.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 28339106 28339444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGGCCAGGAGCTCTTGGCAGCTCAGCCCTGCCGCCCCAGAGCATGTGGCGGCTGCTCTCTACCAGCCGA
GAGCTTCGGAGATGCAGCATCTGCGGCGAATGCCCCGAGTCCGGAGCTTGTTCCAGGAGCAGGAAGAGCC
CGAGCCTGGCATGGAGGAGGCTGGTGAGATGGAGCAGAAGCAGCTGCAGAAGAGATTTGGGGGCTTCACC
GGGGCCCGGAAGTCGGCCAGGAAGTTGGCCAATCAGAAGCGGTTCAGTGAGTTTATGAGGCAATACTTGG
TCCTGAGCATGCAGTCCAGCCAGCGCCGGCGCACCCTGCACCAGAATGGTAATGTGTAG

Translation (112 aa):
MARSSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQKRFGGFT
GARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQNGNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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