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Report for CCDS6709.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6709.2 Public Homo sapiens 9 ZNF169 24 110 108 CCDS HistoryNCBI Gene:169841Re-query CCDS DB by CCDS ID:6709.2Re-query CCDS DB by GeneID:169841See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6709.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395395.7 ENSP00000378792.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395395.7Link to Ensembl Protein Viewer:ENSP00000378792.2Re-query CCDS DB by Nucleotide ID:ENST00000395395Re-query CCDS DB by Protein ID:ENSP00000378792
Original member Current member NCBI NM_194320.4 NP_919301.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_194320.4Link to Protein Sequence:NP_919301.2Re-query CCDS DB by Nucleotide ID:NM_194320Re-query CCDS DB by Protein ID:NP_919301Link to BLAST:NP_919301.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_919301.2 603 Q14929 603 100% 0 0

Chromosomal Locations for CCDS 6709.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 94278813 94278845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94292341 94292467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94292974 94293069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94299815 94301370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGTCACCAGGACTCCTGACAACCAGGAAGGAGGCATTGATGGCCTTCCGGGATGTGGCTGTGGCCTTCA
CCCAGAAGGAGTGGAAGCTATTGAGTTCTGCTCAGAGGACCCTGTACAGGGAGGTGATGCTGGAGAACTA
CAGCCATCTGGTCTCCCTGGGAATTGCATTTTCCAAACCAAAACTCATCGAACAGCTGGAGCAAGGCGAC
GAACCTTGGAGAGAGGAGAACGAACATCTTCTGGACCTTTGTCCAGAGCCTAGAACAGAATTCCAGCCAA
GTTTTCCCCACCTGGTGGCCTTTTCTAGCTCGCAGCTCCTCAGACAATATGCGCTAAGTGGCCATCCCAC
ACAGATCTTCCCAAGCTCATCTGCAGGAGGTGACTTCCAACTAGAAGCTCCAAGATGCTCTAGTGAAAAA
GGAGAAAGTGGAGAGACAGAAGGCCCCGACAGCTCATTAAGAAAGAGGCCAAGCAGAATTTCTAGGACAT
TCTTCAGCCCACATCAAGGTGACCCAGTAGAATGGGTAGAAGGGAACAGAGAAGGAGGAACAGACCTTCG
CCTGGCCCAAAGGATGAGTCTTGGGGGGTCAGACACAATGTTGAAGGGAGCAGACACTTCAGAATCTGGA
GCAGTCATACGTGGAAACTATAGACTGGGACTTAGCAAAAAGTCAAGCCTGTTCAGCCACCAGAAGCATC
ATGTGTGCCCTGAATGCGGGAGAGGCTTTTGCCAGAGATCAGACCTTATCAAGCACCAGAGGACACACAC
CGGGGAGAAGCCATACCTGTGTCCTGAGTGTGGGCGTCGGTTTAGCCAGAAGGCCTCCCTCTCCATACAC
CAGAGGAAGCACTCGGGGGAGAAGCCGTATGTGTGCAGGGAATGTGGGCGACACTTCAGGTATACATCCT
CTCTCACTAATCACAAGAGGATTCACTCCGGGGAGAGGCCCTTTGTATGTCAGGAGTGTGGGCGAGGCTT
TCGCCAGAAGATAGCCCTCCTTCTACACCAGAGGACGCACTTGGAGGAGAAGCCCTTCGTGTGTCCTGAG
TGTGGGAGAGGCTTTTGCCAGAAGGCATCACTCCTCCAGCACCAGAGCTCACACACAGGGGAGAGGCCCT
TCCTGTGCCTTGAGTGTGGGCGTAGCTTCAGGCAGCAGTCACTCCTCCTTAGTCACCAGGTCACACACTC
AGGAGAGAAGCCTTATGTCTGTGCTGAGTGTGGGCACAGCTTTCGCCAAAAGGTCACTCTCATCAGGCAC
CAGAGGACACACACAGGGGAGAAGCCTTACCTGTGCCCCCAGTGTGGGCGGGGTTTTAGCCAGAAGGTCA
CCCTCATTGGACACCAGAGGACACACACAGGGGAGAAGCCCTACCTGTGCCCTGATTGTGGGCGTGGCTT
TGGTCAGAAGGTCACCCTCATCAGACACCAGAGGACACACACAGGGGAGAAGCCTTATCTGTGCCCCAAG
TGTGGGCGTGCATTTGGCTTTAAGTCGCTCCTCACCCGACACCAGAGGACACACTCAGAGGAGGAGCTTT
ACGTAGACAGGGTGTGTGGACAAGGACTTGGCCAGAAGTCACACCTTATCTCTGACCAAAGGACACACTC
AGGAGAGAAGCCCTGCATTTGCGATGAATGTGGGCGCGGCTTTGGCTTTAAGTCTGCCCTCATCCGACAT
CAGCGGACCCATTCTGGGGAGAAGCCGTATGTCTGCAGGGAGTGTGGGCGTGGCTTTAGCCAGAAGTCTC
ACTTGCATAGACACAGGAGGACCAAGTCTGGTCATCAGCTCCTACCCCAAGAGGTCTTCTGA

Translation (603 aa):
MSPGLLTTRKEALMAFRDVAVAFTQKEWKLLSSAQRTLYREVMLENYSHLVSLGIAFSKPKLIEQLEQGD
EPWREENEHLLDLCPEPRTEFQPSFPHLVAFSSSQLLRQYALSGHPTQIFPSSSAGGDFQLEAPRCSSEK
GESGETEGPDSSLRKRPSRISRTFFSPHQGDPVEWVEGNREGGTDLRLAQRMSLGGSDTMLKGADTSESG
AVIRGNYRLGLSKKSSLFSHQKHHVCPECGRGFCQRSDLIKHQRTHTGEKPYLCPECGRRFSQKASLSIH
QRKHSGEKPYVCRECGRHFRYTSSLTNHKRIHSGERPFVCQECGRGFRQKIALLLHQRTHLEEKPFVCPE
CGRGFCQKASLLQHQSSHTGERPFLCLECGRSFRQQSLLLSHQVTHSGEKPYVCAECGHSFRQKVTLIRH
QRTHTGEKPYLCPQCGRGFSQKVTLIGHQRTHTGEKPYLCPDCGRGFGQKVTLIRHQRTHTGEKPYLCPK
CGRAFGFKSLLTRHQRTHSEEELYVDRVCGQGLGQKSHLISDQRTHSGEKPCICDECGRGFGFKSALIRH
QRTHSGEKPYVCRECGRGFSQKSHLHRHRRTKSGHQLLPQEVF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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