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Report for CCDS6886.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6886.1 Public Homo sapiens 9 DPM2 24 110 108 CCDS HistoryNCBI Gene:8818Re-query CCDS DB by CCDS ID:6886.1Re-query CCDS DB by GeneID:8818See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6886.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000314392.13 ENSP00000322181.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000314392.13Link to Ensembl Protein Viewer:ENSP00000322181.8Re-query CCDS DB by Nucleotide ID:ENST00000314392Re-query CCDS DB by Protein ID:ENSP00000322181
Original member Current member NCBI NM_003863.4 NP_003854.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003863.4Link to Protein Sequence:NP_003854.1Re-query CCDS DB by Nucleotide ID:NM_003863Re-query CCDS DB by Protein ID:NP_003854Link to BLAST:NP_003854.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003854.1 84 O94777 84 100% 0 0

Chromosomal Locations for CCDS 6886.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 127935722 127935780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127936553 127936655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127937434 127937523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 127937818 127937820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (255 nt):
ATGGCCACGGGGACAGACCAGGTGGTGGGACTCGGCCTCGTCGCCGTTAGCCTGATCATCTTCACCTACT
ACACCGCCTGGGTGATTCTCTTGCCATTCATCGACAGTCAGCATGTCATCCACAAGTATTTCCTGCCCCG
AGCCTATGCTGTCGCCATCCCACTGGCTGCAGGCCTCCTGCTGCTCCTGTTTGTGGGACTGTTCATCTCC
TATGTGATGCTGAAGACCAAGAGAGTGACCAAGAAGGCTCAGTGA

Translation (84 aa):
MATGTDQVVGLGLVAVSLIIFTYYTAWVILLPFIDSQHVIHKYFLPRAYAVAIPLAAGLLLLLFVGLFIS
YVMLKTKRVTKKAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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