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Report for CCDS69921.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69921.1 Public Mus musculus 1 Mroh2a 23 108 98 CCDS HistoryNCBI Gene:100040766Re-query CCDS DB by CCDS ID:69921.1Re-query CCDS DB by GeneID:100040766See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 69921.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113130.7 ENSMUSP00000108755.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113130.7Link to Ensembl Protein Viewer:ENSMUSP00000108755.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000113130Re-query CCDS DB by Protein ID:ENSMUSP00000108755
Original member Current member NCBI NM_001281466.1 NP_001268395.1 Accepted alive Link to Nucleotide Sequence:NM_001281466.1Link to Protein Sequence:NP_001268395.1Re-query CCDS DB by Nucleotide ID:NM_001281466Re-query CCDS DB by Protein ID:NP_001268395Link to BLAST:NP_001268395.1

Chromosomal Locations for CCDS 69921.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 88228068 88228146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88228227 88228408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88230342 88230473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88230626 88230788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88232244 88232342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88233317 88233468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88234002 88234145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88234970 88235062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88235190 88235268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88235373 88235486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88236655 88236731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88237473 88237592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88237845 88237955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88238894 88239041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88240119 88240159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88240679 88240820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88241071 88241123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88241543 88241650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88242404 88242523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88242669 88242791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88243931 88244083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88244944 88245066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88245988 88246067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88247136 88247244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88247748 88247843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88248552 88248656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88249703 88249826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88250265 88250383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88251245 88251397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88252336 88252490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88254858 88255017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88255090 88255283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88255543 88255680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88256057 88256171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88256400 88256549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88256651 88256833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88257710 88257865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88258583 88258714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88259119 88259221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88259530 88259595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 88259905 88260026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5016 nt):
ATGAAAGAAGCCACTGAGTTGAATGAAGACATGTTGGAGGAAGCAGAGCATCTGGCACTTCTAGAGCCAG
AGGATGATGGTACATTCTTCCAAGTCACCAACCTCCTGAACATCATGGACAGTGAATCAGCAAAGACAGA
CACCACAGGGCCAGGCCTGGACATGCGGAAGACCTTGGCTTCAGTGATAATCACAGAGAAGGCTACCACG
GATCCCTGTGTAGTGATGAACGCGCTCATCCGCTGCCTGCAGATGCCAGAGATTTCTACCCAACGCAAAA
TGAACATCTACAACATCATGCAGGAGATCATCCAGCAGGAAGGGGAGATGGAGGAGCACTGTATACAAAG
GCTGGTGGCCATTGCCTCCAAGCAGATGCGGGATATCACAGAGGCGGAGGATTTTGAGACCGCCGAGGTG
GCCAGTGAGACTCTAGTGGCTCTGTCCCGAAACCACTTCAGCTTGGTCATGTATGAACTGCAGCATCATC
TCAAGCCTCTCAACCTCACTGACGAGTTTGTCATTGTCACCCTGGCCAAGCTGGCCAATGGCAATGTGTT
TGAATTCATGCCCTACATGGGCATCACCCTGGCTACCATATTCACGATGTTGAGACTTGCCAACGAAGCC
AAGATGCGCCAGGTGATCTGTAGTGCCATGGAGACGTTCTGTGAGACGGTGCAGTTTTACCTGAGGCACC
TGGAGGACAGCCTGTATCCCGTGATGACGGAGGACCAGTTTGCTGTGAAGCTCTTCCCAATGTACCGATA
CTTCGTGACCGTGTGGCTGCGCCACCAGGACCTTGAGGTGAAACTGGGAGTCATCAAGTCTCTCAGGCCC
ATGCTGAGCCTTCTCCTGCCTAATGACGACCTGAGGGAACAGGTGTATGACTATATCCCCCTGCTGCTGG
CTGAGTTCCAGGGTGGCCTGGAGGCTCTCTTCGTCACACAGGTCTTGAGGCAGATTCTAGAAGCATCGGT
TACCACCAACACCCCTATCCCCCCGATGCTGCTACACCCCATTTTCACAGAGTTGCACGTCCAGGTGTGC
TCCAAGGCCCCAGCCCAGCAGCAGTTCAGCAGTCAGAACCTGATGGAGATCGTGCACTGCTTCATAGCCC
TGGCCCGCTCCTACCCCAAGGAACTGATGAAGTTCTTCTTCAGCCAGGTGGAGATGAGCAAAGAGGCTGT
CCGTGTGGGGACACTGGCCCTGATCAGGGCAGTAGTGAGCGCAGATGACCCCAAAATTAATATCAAGACC
ATCTACCTGGCCATCCGCGTCGTCAAGAACACTCTCTCTGACACTCGGTCCAAGGTACGGATGGCAATTC
TGCGAATCATTGGCCAGCTGGTTCTGTCAGGCTTCCAGGAAAAGATCAAAGGCTGGGGTCTGAAATATGT
GTCTGTCCAGCTCACCTTATCTACCTACAAGCTGACAAATCGACGGGAATGCTTTTATCAGAGGGATTTG
GAAGAGAAGATGGTTCACAAAGTAACCATGGATACTGTAAAGATCATAACTTCTTCTATCAGCGGCATGA
CCAATGAGTTCTGGGTGAGGCTCCTGTGCTACATCATGGAGACAGACTACACCGAGGCACTGACCCCCAT
CTGCATCAGCCTCACGAACCTGGCCGAGAACCAAATTCATGGCAAAGACACGGAGGCTGGAATAGCTGGA
AAGAGCAAGCATGTGGACTTGCCTGCACCCCAGAAGCTGCTGGCCCGTCTCCTGGTGCTGATGTCATCAC
CCTATAAAGGAGAAGGCCGGGGGATTGCCATGCTCAACCTCCTGCGGACCCTAAGCCAGAGCATTGCTCC
TTCCATGGCTGACATGTGGGAGCAGGAGATCCCTCTGCTAGTCCAGTACCTGGAAGAGCACACTGAGTTT
ACCTGGAACCAGAAGACCTGGGAAGATATGCTGATTCAGTTTCTGAGAAACTCCCTCAAGAAGACCCGTG
GGACCAGCTGGAGCCTACGGCTCAGCAAAGAGCTGAACAACCAGATCGAGACCTTCGACAGCCCCTCCTT
GGAAAAGGGTTTTCTGTACAGGGCCCTGGGTTTCACCTTAGGCATGGGTCTGGAGGCCGACAGGGTGGAA
GTGCTATTATTGGAGCTGCTGTACAAGACAGACTACAGCAATGATTTTGACCGGGAGGGCGTCATCCTGT
GCTTTGGACTGTGTGCCCGGGGCCAGGTAAAGACAGTGTTGAATGTGCTTCAGGACTTTGAGGAGAGGAT
CCAGGAGTCGGAACAGTCCTGGCAGATCGGTGCCTGGAGGAAAGACCACCCCTGGAGGCGAGAGACGGTG
AAGAGTGCCCTAATGGTGATGTACAGCTGTGTGTCCTCTTACTGCCACCCCCAGATGCTCCTCACCCACG
TGGACAGCCCCATCACCTCTAAGATCATCCACCACTACTCCAGCAGCTGCCAGGACATCAGCCTCAAAAT
GGCCTTCATGAAGAGTGTTGTGCAGGTCACCAACGCCATCAAAAGCATCCAAGACCCAGAGGACTTCCAG
TTTGCCCACAAATCTGCTCTTACTGGCCTCATAGTTGTGATCATCAAAGCAGAACCACCTGACCACTTGG
TTTCTCCCGTGAGGTCGATGGCAATGGATGCTCTCTCACAACTAAGCACGATGAAGCCTTTCTACTCTCC
AGAGGAAAGCACAGAGTTGATGGATATCAGCATACACACCGTTATCTCCCTCCAACCCCCAGGGGAAGAC
AATGAGTCTGTTAAGACCCTGTATGCAAATACCATGAGTTCCCTAAAGCAGCTGATGGAGGGCCTCCTGC
AGAGACAGCTGGACCCCAAGGGGCTGCAGGACACTGTGCATCTCCTGGAGAAGTGGATCTTGTCAGAGAA
AGAGTGGGAACGGGAGAAAGCCATGGCCCTCCATCTCCATCTCATGCAGATCTACGTTCAAAGTATTGGT
GTCTGTATCCCGCTGAAGCTGGGGCAGTTTGGAGTACTGGTTGGACTCATCGCTCCATGTACCTGTGATG
CCCACAGAAGAACCCGCTTGGCCTCGATTAACGTCCTGTCCAGTCTGCTAGATCTTCATGTAAGCCAGAC
GTGCTCTTTATGGGGAACTTCCAAGGAGCAGGAGCTGCAGAAATGTAAGGAGGACCTCCAGGACACCGAC
ATGAACAAGATTTCCAGTGCTTCCTCCAGAGTCGCCAAGGTGGTTTGCCCAGAGTTTAACTGCGACGAGG
TTGTCTCTCTCATCCAGAAGCTCTGTGAGAACATTGGGGCCATGGACCTGCAGCATGACAGGGCTGCTGT
CACCTGGATAGGCATCTTCCTCCAGATGCGGGTCAAGGAGCTGGAGGACAAGGTGGCTGAGATACTGGGT
GCCATCTTGGTTCACCTGCCAGTGGTGGATCACCCAGAGGTGAGGCGACATCTCATTGAAGGCATCCTCC
TGCTGGCACACTACCACCAGGAGACCGTCCTCACATCACTTCTGAGACAGCCACTGCCCATGGAAAGCCA
TCTGACAGAGGTGTGGCTGGCCGTGGCTGAGAATGTCCCCTTCGCACGGACCATGCTCCATGGCTTGCTG
GGCCGGCTGCAGTCGAGGTTCACTGCCAAGATAAATGCCACCTCCAAGGCTGACATCTGGCGCCTGGCCG
CTGTGGACCCTCTGATGACGCTGTGTACCATCCAGCTCCTCATGGAAAAGATGGACCAGGATGACAAATT
TCCAGACCTGTTTCCTGACCTGCTGTATACCTTCCTGCTGCAGCTTGGCAGCAGCCATGGGCCAGAAGCT
GCCTCCCCTGTCCTGAAAACCTGGAGACTGGTTCACACAGGGCCACTGCCCCAGGAGATGACCCTGCAGA
GGATCACTATCAAATCCATGCAGCTTTTGGTCAAGAGGATCAACAGAGAGCCCCTGGAGCAGGCCTTGGA
GGAGCAGTCTGTGTGGTCCCTGCTGGAGAACGGAGGCACCTTCCTTGAGGGAGTGAGCCTGATGGCCAGG
CTGTGCATGCAGAACATGGAGAACTACATGCAGAGGCTGGCAGAGCTGGTGCTCACGGGCATGGGCTCCG
AGATCCTGAGCTGCTGCATCAGCAGCACGGCCATCTGTGTAGAATTCATGAGCGACCCAGTTCTGCACCA
GGAGAAGCTGCTGAGGCCGGTGGTGCTGATGCTGGAGAAGGGTGCAGGGCAGGACAAAGATGAGACCTTG
CAGGTGCTCTCTCTGCGTGCCTTGGGCAACATGGCTCTCGGTGCTCCCCGGAAGGTGAAGCAGTATCGAA
AACTCCTGCTGGAGAAGTGCCTGGGCTCCCTGCAGGGGCAGGTGAGCAGCAGTGCCATGGCGGAAGGCAT
GGAGGCCCTCACCAAGGTCCTGGCTGAGCTCCGAGAGGGCGATATAGGGTCTTCTTTTGAAGCCATCTCT
AAGCAGTGCAGAGCTTTCTTCGACAACGAAAGCGAGCTGCTACGGTTGAAGGCCTTTGTTCTCTTTGGGA
AGCTTACAAAAGTGGTTGGGATTTCCAAGAAGCATTTCTTCAAAGGGGAGGTGAAGAGAGGCTGGGTCTC
CCTCCTGCTGCACTGCCAGGACCCCTGCCCCAGCGTGGCCCAGGCATGTGTGGCCACCATGTTTCAGTGT
GTGCATTTCTGGGGCTGGAAGTCCCTGGAGAGTTCCTTTGGTCACAGTAACGACAGCATCAATGAACAGA
TGACAGTTTTTCAGACAAACATGTGCTCCGTCCTGGCCCAGAAAAAGCCTGCTGTTCTCTGTGGCTTCCT
GTTGGAAACAACAGTCTTCATGAAAAACAATCTGTCAAGGATCAGAATTGCTGCCTGCAACTTGGCGGGA
ATTATTATGAAGCAGCTGTCTGCCCATTATCTGAAAAAGATGGACCTTGTGGGACTTCGCAATTCTCTCC
AGGACCTGCAGCTAGACTCAGACGCTGGGGTCAGGAGGGCAGCCTTGGAGACCCTCAAAGTCCTGGACAG
CTGCAATCAGCACTGGCTCTTAGCGTCACCCAGAGGACTGCCGTAA

Translation (1671 aa):
MKEATELNEDMLEEAEHLALLEPEDDGTFFQVTNLLNIMDSESAKTDTTGPGLDMRKTLASVIITEKATT
DPCVVMNALIRCLQMPEISTQRKMNIYNIMQEIIQQEGEMEEHCIQRLVAIASKQMRDITEAEDFETAEV
ASETLVALSRNHFSLVMYELQHHLKPLNLTDEFVIVTLAKLANGNVFEFMPYMGITLATIFTMLRLANEA
KMRQVICSAMETFCETVQFYLRHLEDSLYPVMTEDQFAVKLFPMYRYFVTVWLRHQDLEVKLGVIKSLRP
MLSLLLPNDDLREQVYDYIPLLLAEFQGGLEALFVTQVLRQILEASVTTNTPIPPMLLHPIFTELHVQVC
SKAPAQQQFSSQNLMEIVHCFIALARSYPKELMKFFFSQVEMSKEAVRVGTLALIRAVVSADDPKINIKT
IYLAIRVVKNTLSDTRSKVRMAILRIIGQLVLSGFQEKIKGWGLKYVSVQLTLSTYKLTNRRECFYQRDL
EEKMVHKVTMDTVKIITSSISGMTNEFWVRLLCYIMETDYTEALTPICISLTNLAENQIHGKDTEAGIAG
KSKHVDLPAPQKLLARLLVLMSSPYKGEGRGIAMLNLLRTLSQSIAPSMADMWEQEIPLLVQYLEEHTEF
TWNQKTWEDMLIQFLRNSLKKTRGTSWSLRLSKELNNQIETFDSPSLEKGFLYRALGFTLGMGLEADRVE
VLLLELLYKTDYSNDFDREGVILCFGLCARGQVKTVLNVLQDFEERIQESEQSWQIGAWRKDHPWRRETV
KSALMVMYSCVSSYCHPQMLLTHVDSPITSKIIHHYSSSCQDISLKMAFMKSVVQVTNAIKSIQDPEDFQ
FAHKSALTGLIVVIIKAEPPDHLVSPVRSMAMDALSQLSTMKPFYSPEESTELMDISIHTVISLQPPGED
NESVKTLYANTMSSLKQLMEGLLQRQLDPKGLQDTVHLLEKWILSEKEWEREKAMALHLHLMQIYVQSIG
VCIPLKLGQFGVLVGLIAPCTCDAHRRTRLASINVLSSLLDLHVSQTCSLWGTSKEQELQKCKEDLQDTD
MNKISSASSRVAKVVCPEFNCDEVVSLIQKLCENIGAMDLQHDRAAVTWIGIFLQMRVKELEDKVAEILG
AILVHLPVVDHPEVRRHLIEGILLLAHYHQETVLTSLLRQPLPMESHLTEVWLAVAENVPFARTMLHGLL
GRLQSRFTAKINATSKADIWRLAAVDPLMTLCTIQLLMEKMDQDDKFPDLFPDLLYTFLLQLGSSHGPEA
ASPVLKTWRLVHTGPLPQEMTLQRITIKSMQLLVKRINREPLEQALEEQSVWSLLENGGTFLEGVSLMAR
LCMQNMENYMQRLAELVLTGMGSEILSCCISSTAICVEFMSDPVLHQEKLLRPVVLMLEKGAGQDKDETL
QVLSLRALGNMALGAPRKVKQYRKLLLEKCLGSLQGQVSSSAMAEGMEALTKVLAELREGDIGSSFEAIS
KQCRAFFDNESELLRLKAFVLFGKLTKVVGISKKHFFKGEVKRGWVSLLLHCQDPCPSVAQACVATMFQC
VHFWGWKSLESSFGHSNDSINEQMTVFQTNMCSVLAQKKPAVLCGFLLETTVFMKNNLSRIRIAACNLAG
IIMKQLSAHYLKKMDLVGLRNSLQDLQLDSDAGVRRAALETLKVLDSCNQHWLLASPRGLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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