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Report for CCDS71078.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
71078.1 Public Mus musculus 2 Osbpl6 23 108 98 CCDS HistoryNCBI Gene:99031Re-query CCDS DB by CCDS ID:71078.1Re-query CCDS DB by GeneID:99031See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 71078.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000111929.7 ENSMUSP00000107560.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000111929.7Link to Ensembl Protein Viewer:ENSMUSP00000107560.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000111929Re-query CCDS DB by Protein ID:ENSMUSP00000107560
Original member Current member NCBI NM_001290733.1 NP_001277662.1 Accepted alive Link to Nucleotide Sequence:NM_001290733.1Link to Protein Sequence:NP_001277662.1Re-query CCDS DB by Nucleotide ID:NM_001290733Re-query CCDS DB by Protein ID:NP_001277662Link to BLAST:NP_001277662.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277662.1 959 Q8BXR9-1 959 100% 0 0

Chromosomal Locations for CCDS 71078.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 76524043 76524144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76540104 76540196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76545978 76546100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76548319 76548372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76549440 76549553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76549661 76549831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76552118 76552250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76555014 76555117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76555890 76555982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76560186 76560260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76564784 76564949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76568109 76568242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76577012 76577119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76579173 76579310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76584461 76584548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76585016 76585269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76586114 76586251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76586715 76586778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76588552 76588630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76590314 76590458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76591784 76591928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76593340 76593466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76594764 76594886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 76595874 76595982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2880 nt):
ATGAGTTCAGACGAGAAGGGCATATCCCCTGCTCATAAAACATCCACTCCGACCCATAGAAGTGCCTCGT
CTTCAACATCTTCTCAGAGGGAAAGCAGACAGAGCATCCACGTTTTGGAGAGAACTGCTTCATCCAGCAC
GGAGCCCTCTGTCAGTCGGCAGTTGCTAGAGCCGGAGCCCATCCCCCTCTCCAAGGAAGCTGACAGCTGG
GAAATTATAGAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAAACCAGACAGGCACGAGGGATTTATGC
TGAAGAAAAGAAAATGGCCTTTAAAGGGCTGGCACAAGCGCTTTTTTGTCCTGGATAATGGAATGCTGAA
GTATTCCAAGGCGCCACTTGATATCCAAAAAGGAAAAGTGCACGGGAGCATAGATGTCGGACTGTCTGTC
ATGTCGATTAAAAAGAAAGCTCGGAGGATAGACCTTGACACGGAAGAGCACATCTATCATTTGAAGGTGA
AATCCCAGGACTGGTTTGACGCTTGGGTCTCCAAACTGCGCCATCACAGGTTGTACCGTCAGAATGAAAT
TGTGAGGTCGCCGAGAGATGCCAGTTTCCACATATTTCCTGCAACTTCGACAGCTGAGTCCTCCCCGGCT
GCTAATGTCTCTGTTGTGGATGGAAAGATGCAGCCCAACAGCTTTCCATGGCAGTCGCCATTACCATGCA
GTAACAGCCTCCCTGCGACCTGCACAACTGGGCAGAGTAAAGTGGCAGCCTGGCTGCAGGACTCAGAAGA
AATGGACAGGTGTGCAGAAGATCTTGCACACTGCCAGTCAAACCTTGTGGAACTTAGCAAGCTCCTGCAA
AACTTGGAGATCCTTCAGAGAACTCAGTCGGCGCCTAACTTCACTGACATGCAGGCTAACTGTGTAGATA
TTTCAAAGAAAGACAAGCGGGTCACAAGACGCTGGAGGACAAAAAGTGTCAGCAAAGATACAAAAATACA
GCTCCAGGAAGGGCCACCTGCGAAGGGCCAGTTCAACACAACTCGGCGCCGGCAGAGGCTAGCGGCAGCA
GTGGCTACAACAGTTCCTTTCAGCGCCACCATGTCACCCGTGCGTCTGCACTCCTCCAACCCCAACCTTT
GTGCAGACATTGAGTTCCAGACCCCTCCTAGCCACCTCACCGACCCTCTGGAAAGTTCCACGGATTATAC
CAAGCTACAAGAAGAATTTTGTCTAATTGCACAGAAAGTGCATTCTCTTCTGAAGTCTGCATTTAACAGC
ATAGCTATAGAGAAGGAGAAGCTGAAGCAGGTGGTCTCGGAGCAAGATCACAACAAAGGCCACAGCACAC
AGATGGCCAGACTCCGGCAGTCACTGTCACAGGCACTTAACCAGAACGCTGAGCTCCGGAGTCGGCTGAA
CAGAATACACTCAGAGTCTACCATTTGTGATCACGTTGTCAGTGTAAATATTATCCCTAGCCCCGATGAG
CCTGGTGAGCAAATCCATGTCAGCCTCCCTCTGTCACAGCAGGTGGCCAACGAGAGCCGCCTCTCCATGT
CAGAATCCGTGTCAGAATTCTTCGATGCCCAAGAGGTGCTCCTGTCTGCAAGCTCATCAGAGAATGAGGC
TTCTGATGATGAGTCCTACATCAGCGACGTGAGTGACAACATATCTGAGGACAACACCAGTGTCGCCGAC
AACATTTCTCGGCAAATCCTGAATGGGGAGCTCACAGGAGGCGCCTTCCGCAATGGCCGTCGCACCTGCC
TGCCTGCTCCTTGCCCGGACACCAGTAACATTAACCTGTGGAATATCTTGAGGAACAACATTGGCAAAGA
CCTGTCGAAGGTCTCCATGCCCGTGGAACTCAACGAGCCCCTCAACACCCTGCAGCACCTCTGTGAGGAA
ATGGAATACAGTGAGCTCCTGGACAAGGCCTCAGAGACCGACGACCCCTACGAGAGGATGGTTCTCGTCG
CTGCCTTTGCAGTCTCAGGGTACTGTTCCACCTACTTCCGAGCAGGAAGCAAGCCATTCAATCCGGTCCT
GGGGGAGACCTATGAATGCATAAGAGAAGATAAGGGGTTTCGGTTCTTCTCAGAACAAGTTAGCCATCAT
CCACCCATTTCTGCCTGTCACTGTGAATCCAAGAATTTTGTGTTTTGGCAAGATATCAGATGGAAAAATA
AGTTCTGGGGAAAGTCCATGGAAATCCTGCCTGTCGGAACCCTGAACGTCACGCTTCCAAAATATGGGGA
TTACTATGTGTGGAATAAAGTCACCACGTGCATACACAATATCCTGAGTGGGAGGAGATGGATCGAGCAC
TACGGTGAAGTGACCCTTAGAAATACCAAAAGCAGTGTTTGCATTTGCAAACTCACGTTTGTCAAGGTGA
ATTACTGGAACTCCAACGTGAATGAAGTCCAGGGGGTGGTGATAGACCAGGAGGGGAAGGTGGTGCACCG
GCTGTTTGGGAAATGGCACGAAGGACTCTACTGCGGGGTGGCCCCCTCGGCAAAGTGCATCTGGAGACCA
GGTTCTCTGCCAACCAACTATGAGCTCTACTATGGCTTTACAAGATTTGCTGTGGAGCTCAATGAGTTGG
ACCCCGTCCTGAAGGACCTCCTTCCCCCCACAGATGCCCGATTCCGGCCAGATCAAAGGTTTTTGGAAGA
AGGGAACCTAGAAGCCGCAGCCGCAGAGAAACAAAGAGTTGAGGAACTCCAAAGATCGCGAAGACGCTAC
ATGGAGGAAAACAACCTTGAACATATACCAAAATTTTTTAAAAAAGTTATTGATGCAAATCAAAGAGAAG
CCTGGGTTTCTAACGACACCTACTGGGAGCTTCGAAAGGACCCTGGGTTTAGCAAAGTAGACAGCCCCGT
TCTTTGGTAA

Translation (959 aa):
MSSDEKGISPAHKTSTPTHRSASSSTSSQRESRQSIHVLERTASSSTEPSVSRQLLEPEPIPLSKEADSW
EIIEGLKIGQTNVQKPDRHEGFMLKKRKWPLKGWHKRFFVLDNGMLKYSKAPLDIQKGKVHGSIDVGLSV
MSIKKKARRIDLDTEEHIYHLKVKSQDWFDAWVSKLRHHRLYRQNEIVRSPRDASFHIFPATSTAESSPA
ANVSVVDGKMQPNSFPWQSPLPCSNSLPATCTTGQSKVAAWLQDSEEMDRCAEDLAHCQSNLVELSKLLQ
NLEILQRTQSAPNFTDMQANCVDISKKDKRVTRRWRTKSVSKDTKIQLQEGPPAKGQFNTTRRRQRLAAA
VATTVPFSATMSPVRLHSSNPNLCADIEFQTPPSHLTDPLESSTDYTKLQEEFCLIAQKVHSLLKSAFNS
IAIEKEKLKQVVSEQDHNKGHSTQMARLRQSLSQALNQNAELRSRLNRIHSESTICDHVVSVNIIPSPDE
PGEQIHVSLPLSQQVANESRLSMSESVSEFFDAQEVLLSASSSENEASDDESYISDVSDNISEDNTSVAD
NISRQILNGELTGGAFRNGRRTCLPAPCPDTSNINLWNILRNNIGKDLSKVSMPVELNEPLNTLQHLCEE
MEYSELLDKASETDDPYERMVLVAAFAVSGYCSTYFRAGSKPFNPVLGETYECIREDKGFRFFSEQVSHH
PPISACHCESKNFVFWQDIRWKNKFWGKSMEILPVGTLNVTLPKYGDYYVWNKVTTCIHNILSGRRWIEH
YGEVTLRNTKSSVCICKLTFVKVNYWNSNVNEVQGVVIDQEGKVVHRLFGKWHEGLYCGVAPSAKCIWRP
GSLPTNYELYYGFTRFAVELNELDPVLKDLLPPTDARFRPDQRFLEEGNLEAAAAEKQRVEELQRSRRRY
MEENNLEHIPKFFKKVIDANQREAWVSNDTYWELRKDPGFSKVDSPVLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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