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Report for CCDS7165.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7165.1 Public Homo sapiens 10 MTPAP 24 110 108 CCDS HistoryNCBI Gene:55149Re-query CCDS DB by CCDS ID:7165.1Re-query CCDS DB by GeneID:55149See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7165.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263063.9 ENSP00000263063.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263063.9Link to Ensembl Protein Viewer:ENSP00000263063.3Re-query CCDS DB by Nucleotide ID:ENST00000263063Re-query CCDS DB by Protein ID:ENSP00000263063
Original member Current member NCBI NM_018109.4 NP_060579.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018109.4Link to Protein Sequence:NP_060579.3Re-query CCDS DB by Nucleotide ID:NM_018109Re-query CCDS DB by Protein ID:NP_060579Link to BLAST:NP_060579.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060579.3 582 Q9NVV4-1 582 100% 0 0

Chromosomal Locations for CCDS 7165.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 30313609 30313971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30315963 30316036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30316118 30316210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30322391 30322617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30326424 30326635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30336803 30337027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30340226 30340450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30341468 30341640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30349119 30349275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1749 nt):
ATGGCGGTTCCCGGCGTGGGGCTCTTGACCCGTTTGAACCTGTGTGCCCGGAGAAGAACTCGAGTCCAGC
GGCCTATCGTCAGGCTTTTGAGTTGCCCAGGAACTGTGGCCAAAGACCTTAGGAGAGACGAGCAGCCTTC
AGGGAGCGTGGAGACAGGCTTTGAAGACAAGATTCCCAAAAGGAGATTCTCTGAGATGCAAAATGAAAGA
CGAGAACAGGCACAGCGGACTGTTTTAATACATTGCCCAGAGAAAATCAGTGAAAACAAGTTTCTTAAAT
ATTTATCCCAATTTGGACCTATTAATAATCATTTCTTCTATGAAAGCTTTGGTCTCTATGCTGTCGTAGA
ATTTTGCCAAAAGGAAAGCATAGGTTCACTGCAGAATGGGACTCATACTCCAAGCACGGCCATGGAGACT
GCAATTCCATTCAGATCACGTTTCTTCAATCTGAAGTTGAAAAACCAGACTTCTGAACGGTCACGCGTAC
GGTCAAGTAATCAGTTGCCACGTTCAAACAAGCAGCTTTTTGAATTACTTTGTTATGCAGAAAGTATAGA
CGATCAGCTGAACACTCTCTTGAAGGAGTTCCAGCTAACAGAGGAGAACACTAAGCTCCGATATCTCACC
TGTTCTCTTATTGAAGACATGGCCGCCGCGTATTTTCCAGACTGCATAGTCAGACCCTTTGGCTCCTCAG
TCAACACTTTTGGGAAGTTAGGATGTGATTTGGACATGTTTTTGGATCTAGATGAAACCAGAAACCTCAG
CGCTCACAAGATCTCAGGAAATTTTCTGATGGAATTTCAAGTGAAAAATGTTCCTTCAGAAAGAATTGCA
ACTCAGAAGATCCTGTCTGTGTTAGGAGAGTGCCTTGACCACTTTGGCCCTGGCTGTGTGGGTGTGCAAA
AAATATTAAATGCCCGGTGTCCGCTCGTGAGGTTCTCACACCAGGCCTCCGGATTTCAGTGTGATTTGAC
TACGAACAATAGGATTGCCTTGACAAGTTCCGAACTCCTTTATATATATGGTGCCCTAGACTCAAGAGTG
AGAGCCTTGGTGTTCAGTGTACGGTGCTGGGCTCGAGCACATTCACTAACAAGTAGTATTCCTGGTGCAT
GGATTACAAATTTCTCCCTTACAATGATGGTCATCTTTTTTCTCCAGAGAAGATCACCCCCTATTCTTCC
AACACTAGATTCCTTAAAAACCCTAGCAGATGCAGAAGATAAATGTGTAATAGAAGGCAACAACTGCACA
TTTGTTCGTGACTTGAGTAGAATTAAACCTTCACAGAACACAGAAACATTAGAATTACTACTGAAGGAAT
TTTTTGAGTATTTTGGCAATTTTGCTTTCGATAAAAATTCCATAAATATTCGACAGGGAAGGGAGCAAAA
CAAACCTGATTCTTCTCCTCTGTACATTCAGAATCCATTTGAAACTTCTCTCAACATAAGCAAAAATGTA
AGTCAAAGCCAGCTGCAAAAATTTGTAGATTTGGCCCGAGAAAGTGCCTGGATTTTACAACAGGAAGATA
CAGATCGACCTTCCATATCAAGTAATCGGCCCTGGGGGCTGGTATCCCTATTGCTACCATCTGCTCCAAA
CAGAAAGTCCTTTACCAAGAAGAAAAGCAATAAGTTTGCAATTGAAACAGTCAAAAACTTGCTAGAATCT
TTAAAAGGTAACAGAACAGAAAATTTCACAAAAACCAGTGGGAAGAGAACAATTAGTACTCAGACATGA

Translation (582 aa):
MAVPGVGLLTRLNLCARRRTRVQRPIVRLLSCPGTVAKDLRRDEQPSGSVETGFEDKIPKRRFSEMQNER
REQAQRTVLIHCPEKISENKFLKYLSQFGPINNHFFYESFGLYAVVEFCQKESIGSLQNGTHTPSTAMET
AIPFRSRFFNLKLKNQTSERSRVRSSNQLPRSNKQLFELLCYAESIDDQLNTLLKEFQLTEENTKLRYLT
CSLIEDMAAAYFPDCIVRPFGSSVNTFGKLGCDLDMFLDLDETRNLSAHKISGNFLMEFQVKNVPSERIA
TQKILSVLGECLDHFGPGCVGVQKILNARCPLVRFSHQASGFQCDLTTNNRIALTSSELLYIYGALDSRV
RALVFSVRCWARAHSLTSSIPGAWITNFSLTMMVIFFLQRRSPPILPTLDSLKTLADAEDKCVIEGNNCT
FVRDLSRIKPSQNTETLELLLKEFFEYFGNFAFDKNSINIRQGREQNKPDSSPLYIQNPFETSLNISKNV
SQSQLQKFVDLARESAWILQQEDTDRPSISSNRPWGLVSLLLPSAPNRKSFTKKKSNKFAIETVKNLLES
LKGNRTENFTKTSGKRTISTQT


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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