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Report for CCDS72038.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72038.1 Public Mus musculus 7 Aqp8 23 108 98 CCDS HistoryNCBI Gene:11833Re-query CCDS DB by CCDS ID:72038.1Re-query CCDS DB by GeneID:11833See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72038.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098056.5 ENSMUSP00000095664.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098056.5Link to Ensembl Protein Viewer:ENSMUSP00000095664.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000098056Re-query CCDS DB by Protein ID:ENSMUSP00000095664
Original member Current member NCBI NM_007474.2 NP_031500.1 Accepted alive Link to Nucleotide Sequence:NM_007474.2Link to Protein Sequence:NP_031500.1Re-query CCDS DB by Nucleotide ID:NM_007474Re-query CCDS DB by Protein ID:NP_031500Link to BLAST:NP_031500.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031500.1 261 P56404 261 100% 0 0

Chromosomal Locations for CCDS 72038.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 123462447 123462458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123462571 123462818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123464189 123464315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123465109 123465323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123466586 123466720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 123467408 123467456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGTCTGGGGAGCAGACACCAATGTGTAGTATGGACCTACCTGAGGTCAAGGTGAAGACCAGCATGGCTG
GCAGATGCCGTGTGTTCTGGTATGAGCAATACGTACAACCATGTATAGTGGAACTTGTGGGCTCCGCTCT
CTTCATCTTCATCGGATGTCTATCGGTCATTGAGAATAGTCCGAATACTGGGCTCCTGCAGCCTGCCTTG
GCTCATGGGCTGGCCTTGGGGCTCATCATTGCTACCTTGGGGAACATCAGCGGTGGACACTTCAACCCTG
CTGTGTCGCTGGCAGTCACAGTGATCGGAGGCCTCAAGACCATGCTGCTAATTCCCTATTGGATCTCCCA
GCTATTTGGAGGGCTGATTGGGGCTGCCTTGGCTAAAGTGGTGAGTCCAGAGGAAAGATTCTGGAATGCA
TCTGGGGCAGCCTTTGCCATCGTCCAGGAGCAGGAGCAGGTGGCAGAAGCCCTGGGGATAGAGATCATTC
TGACAATGCTGTTGGTATTGGCTGTGTGTATGGGTGCTGTCAATGAGAAGACAATGGGCCCTTTAGCCCC
ATTCTCCATTGGCTTCTCTGTCATTGTGGACATCCTGGCAGGTGGTAGCATCTCTGGAGCCTGCATGAAC
CCTGCTCGTGCCTTTGGACCTGCTGTGATGGCTGGCTACTGGGACTTCCATTGGATCTACTGGCTGGGCC
CCCTCCTGGCTGGCCTCTTTGTAGGACTGCTCATTAGGCTCCTCATCGGAGATGAGAAAACCCGCCTAAT
TCTAAAGTCGAGGTGA

Translation (261 aa):
MSGEQTPMCSMDLPEVKVKTSMAGRCRVFWYEQYVQPCIVELVGSALFIFIGCLSVIENSPNTGLLQPAL
AHGLALGLIIATLGNISGGHFNPAVSLAVTVIGGLKTMLLIPYWISQLFGGLIGAALAKVVSPEERFWNA
SGAAFAIVQEQEQVAEALGIEIILTMLLVLAVCMGAVNEKTMGPLAPFSIGFSVIVDILAGGSISGACMN
PARAFGPAVMAGYWDFHWIYWLGPLLAGLFVGLLIRLLIGDEKTRLILKSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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