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Report for CCDS72348.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72348.1 Public Mus musculus X Klhl13 23 108 98 CCDS HistoryNCBI Gene:67455Re-query CCDS DB by CCDS ID:72348.1Re-query CCDS DB by GeneID:67455See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72348.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000115319.8 ENSMUSP00000110974.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000115319.8Link to Ensembl Protein Viewer:ENSMUSP00000110974.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000115319Re-query CCDS DB by Protein ID:ENSMUSP00000110974
Original member Current member NCBI NM_001290476.2 NP_001277405.1 Accepted alive Link to Nucleotide Sequence:NM_001290476.2Link to Protein Sequence:NP_001277405.1Re-query CCDS DB by Nucleotide ID:NM_001290476Re-query CCDS DB by Protein ID:NP_001277405Link to BLAST:NP_001277405.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277405.1 648 Q80TF4-2 648 100% 0 0

Chromosomal Locations for CCDS 72348.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 23220365 23220852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23228574 23228687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23235226 23236021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23247361 23247557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23248112 23248244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23261435 23261573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 23285158 23285237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1947 nt):
ATGCTGAGGTTTATATCCCATTTGTACTGTTGCAGCTCAAAAGAAGAATGTTCAGAGGATGACAAATGTA
TTCTGAGTAGATCACTTGTGGAAGAGGAAGACCAGCACTTGAAACTGTGCCTTGGAAGTGAAATGGGCCT
CTCTTCCCATTTGCAGTCTTGCAAGGCAGGAAGTACACGCATCTTTACCAGCAACAGCCACAGTTCTGTG
GTGTTACAGGGCTTTGACCAGCTTCGGCTTGATGGATTGCTTTGTGATGTGACACTGATGCCAGGTGATA
CAGATGATGCTTACCCTGTGCACAGAGTCATGATGGCATCTGCTAGTGACTACTTCAAAGCTATGTTCAC
AGGTGGAATGAAAGAACAAGAGCTGATGTGCATTAAGCTTCATGGCGTGAGCAGAGTGGGTCTACGGAAA
ATTATTGATTTCATCTATACTGCAAAGCTTTCTCTTAACATGGACACCCTTCAGGATACGCTGGAAGCCG
CCAGCTTTCTTCAGATTCTTCCGGTTTTAGACTTCTGCAAAGTGTTTCTCATATCTGGGGTCACTTTGGA
TAACTGTGTTGAAGTTGGACGGATTGCCAACACCTACCATCTGACAGAAGTGGATAAATATGTCAACAGC
TTCGTCTTAAAGAATTTTGCTGCATTGCTGAGCACTGGGGAGTTCCTGAAGCTTCCCTTCGAGCGCCTTG
CCTTTGTCCTGTCCAGCAACAGCCTTAAGCGCTGCACCGAACTTGACCTCTTCAAAGCTACCTGTCGCTG
GCTTCGCCTGGAAGAACCTAGAATGGACGTTGCTGCAAAACTAATGAAGAATATACGATTTCCGCTGATG
ACACCACAGGAGCTCATTAATTATGTGCAAACCGTGGATTTCATGAGAACTGACAATACTTGCGTCAATT
TGCTTCTGGAAGCCAGCAATTACCAAATGATGCCGTTTATGCAGCCAGTTATGCAGTCAGACAGGACTGC
CATTCGGTCTGACACCACTCGTTTGGTTACACTCGGAGGAGTCCTGAGACAGCAGCTTGTCGTCAGTAAA
GAATTGCGCATGTATGATGAAAAGACCCACGAGTGGAAATCTCTAGCCCCCATGGATGCCCCAAGATACC
AGCATGGCATTGCTGTCATCGGAAATTTTCTCTACGTTGTTGGTGGGCAGAGTAATTATGACACAAAAGG
AAAAACCGCCGTCGATACAGTGTTTAGATTTGATCCTCGATACAACAAATGGATCCAAGTTGCATCTTTA
AATGAAAAGCGCACCTTCTTCCACCTAAGTGCCCTCAAAGGATTTCTGTATGCAGTTGGTGGACGAAATG
CAGCTGGAGAACTCCCTACTGTGGAATGTTACAATCCGAGAACAAATGAATGGACCTATGTTGCCAAAAT
GAATGAACCTCACTATGGCCATGCTGGAACTGTGTATGGAGGAGTGATGTATATTTCAGGAGGAATTACC
CATGACACTTTCCAAAAGGAGCTCATGTGCTTCGACCCTGATACTGACAAATGGACCCAGAAGGCACCGA
TGACCACTGTCCGAGGCCTACACTGCATGTGTACGGTGGGAGATAGGCTCTACGTCATTGGTGGCAACCA
TTTCCGAGGAACCAGTGATTATGATGATGTCCTGAGCTGTGAATACTACTCACCTATCCTTGACCAGTGG
ACCCCAATTGCTTCCATGTTAAGAGGGCAGAGTGATGTTGGGGTCGCTGTCTTTGAGAATAAAATCTATG
TGGTTGGTGGCTATTCATGGAATAATCGCTGTATGGTAGAGATAGTGCAGAAGTATGATCCAGAGAAAAA
TGAATGGCATAAGGTTTTCGATCTGCCAGAGTCTCTTGGTGGTATTCGAGCTTGTACACTTACAGTTTAT
CCACCTGAAGAAGCCACACCATCACCTTCTAGAGAGTCCCCTCTTTCTGGACCCTAA

Translation (648 aa):
MLRFISHLYCCSSKEECSEDDKCILSRSLVEEEDQHLKLCLGSEMGLSSHLQSCKAGSTRIFTSNSHSSV
VLQGFDQLRLDGLLCDVTLMPGDTDDAYPVHRVMMASASDYFKAMFTGGMKEQELMCIKLHGVSRVGLRK
IIDFIYTAKLSLNMDTLQDTLEAASFLQILPVLDFCKVFLISGVTLDNCVEVGRIANTYHLTEVDKYVNS
FVLKNFAALLSTGEFLKLPFERLAFVLSSNSLKRCTELDLFKATCRWLRLEEPRMDVAAKLMKNIRFPLM
TPQELINYVQTVDFMRTDNTCVNLLLEASNYQMMPFMQPVMQSDRTAIRSDTTRLVTLGGVLRQQLVVSK
ELRMYDEKTHEWKSLAPMDAPRYQHGIAVIGNFLYVVGGQSNYDTKGKTAVDTVFRFDPRYNKWIQVASL
NEKRTFFHLSALKGFLYAVGGRNAAGELPTVECYNPRTNEWTYVAKMNEPHYGHAGTVYGGVMYISGGIT
HDTFQKELMCFDPDTDKWTQKAPMTTVRGLHCMCTVGDRLYVIGGNHFRGTSDYDDVLSCEYYSPILDQW
TPIASMLRGQSDVGVAVFENKIYVVGGYSWNNRCMVEIVQKYDPEKNEWHKVFDLPESLGGIRACTLTVY
PPEEATPSPSRESPLSGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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