NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS73833.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73833.1 Public Homo sapiens 16 RRN3 24 110 108 CCDS HistoryNCBI Gene:54700Re-query CCDS DB by CCDS ID:73833.1Re-query CCDS DB by GeneID:54700See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73833.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000429751.6 ENSP00000402027.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000429751.6Link to Ensembl Protein Viewer:ENSP00000402027.2Re-query CCDS DB by Nucleotide ID:ENST00000429751Re-query CCDS DB by Protein ID:ENSP00000402027
Original member Current member NCBI NM_001301064.1 NP_001287993.1 Accepted alive Link to Nucleotide Sequence:NM_001301064.1Link to Protein Sequence:NP_001287993.1Re-query CCDS DB by Nucleotide ID:NM_001301064Re-query CCDS DB by Protein ID:NP_001287993Link to BLAST:NP_001287993.1

Chromosomal Locations for CCDS 73833.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 15061744 15061905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15063196 15063283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15065219 15065371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15068169 15068277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15070070 15070254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15071121 15071251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15072950 15073080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15074723 15074861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15076558 15076650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15079998 15080096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15083513 15083582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15084642 15084705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15085639 15085698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15086129 15086258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15091315 15091371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15092509 15092614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15094145 15094233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1866 nt):
ATGGCGGCACCGCTGCTTCACACGCGTTTGCCGGGAGATGCGGCCGCTTCGTCCTCTGCAGTTAAGAAGC
TGGGCGCGTCGAGGACTGGGATTTCAAATATGCGTGCATTAGAGAATGACTTTTTCAATTCTCCCCCAAG
AAAAACTGTTCGGTTTGGTGGAACTGTGACAGAAGTCTTGCTGAAGTACAAAAAGGGTGAAACAAATGAC
TTTGAGTTGTTGAAGAACCAGCTGTTAGATCCAGACATAAAGAGATTGCCTTGGTTGAATAGAAGTCAAA
CAGTAGTGGAAGAGTATTTGGCTTTTCTTGGTAATCTTGTATCAGCACAGACTGTTTTCCTCAGACCGTG
TCTCAGCATGATTGCTTCCCATTTTGTGCCTCCCCGAGTGATCATTAAGGAAGGCGATGTAGATGTTTCA
GATTCTGATGATGAAGATGATAATCTTCCTGCAAATTTTGACACATGTCACAGAGCCTTGCAAATAATAG
CAAGATATGTACCATCGACACCGTGGTTTCTCATGCCAATACTGGTGGAAAAATTTCCATTTGTTCGAAA
ATCAGAGAGAACACTGGAATGTTACGTTCATAACTTACTAAGGATTAGTGTATATTTTCCAACCTTGAGG
CATGAAATTCTGGAGCTTATTATTGAAAAACTACTCAAGTTGGATGTGAATGCATCCCGGCAGGGTATTG
AAGATGCTGAAGAAACAGCAACTCAAACTTGTGGTGGGACAGATTCCACGGAAGGATTGTTTAATATGGA
TGAAGATGAAGAAACTGAACATGAAACAAAGGCTGGTCCTGAACGGCTCGACCAGATGGTGCATCCTGTA
GCCGAGCGCCTGGACATCCTGATGTCTTTGGTTTTGTCCTACATGAAGGATGTCTGCTATGTAGATGGTA
AGGTTGATAACGGCAAAACAAAGGATCTATATCGCGACCTGATAAACATCTTTGACAAACTCCTGTTGCC
CACCCATGCCTCCTGCCATGTACAGTTTTTCATGTTTTACCTCTGTAGTTTCAAATTGGGATTCGCAGAG
GCATTTTTGGAACATCTCTGGAAAAAATTGCAGGACCCAAGTAATCCTGCCATCATCAGGCAGGCTGCTG
GAAATTATATTGGAAGCTTTTTGGCAAGAGCTAAATTTATTCCTCTTATTACTGTAAAATCATGCCTAGA
TCTTTTGGTTAACTGGCTGCACATATACCTTAATAACCAGGATTCGGGAACAAAGGCATTCTGCGATGTT
GCTCTCCATGGACCATTTTACTCAGCCTGCCAAGCTGTGTTCTACACCTTTGTTTTTAGACACAAGCAGC
TTTTGAGCGGAAACCTGAAAGAAGGTTTGCAGTATCTTCAGAGTCTGAATTTTGAGCGGATAGTGATGAG
CCAGCTAAATCCCCTGAAGATTTGCCTGCCCTCAGTGGTTAACTTTTTTGCTGCAATCACAAATAAGTAC
CAGCTCGTCTTCTGCTACACCATCATTGAGAGGAACAATCGCCAGATGCTGCCAGTCATTAGGAGTACCG
CTGGAGGAGACTCAGTGCAGATCTGCACAAACCCGCTGGACACCTTCTTCCCCTTTGATCCCTGTGTGCT
GAAGAGGTCAAAGAAATTCATTGATCCTATTTATCAGGTGTGGGAAGACATGAGTGCTGAAGAGCTACAG
GAGTTCAAGAAACCCATGAAAAAGGACATAGTGGAAGATGAAGATGATGACTTTCTGAAAGGCGAAGTGC
CCCAGAATGATACCGTGATTGGGATCACACCAAGCTCCTTTGACACGCATTTCCGAAGTCCTTCAAGTAG
TGTGGGCTCCCCACCCGTGTTGTACATGCAACCCAGTCCCCTCTGA

Translation (621 aa):
MAAPLLHTRLPGDAAASSSAVKKLGASRTGISNMRALENDFFNSPPRKTVRFGGTVTEVLLKYKKGETND
FELLKNQLLDPDIKRLPWLNRSQTVVEEYLAFLGNLVSAQTVFLRPCLSMIASHFVPPRVIIKEGDVDVS
DSDDEDDNLPANFDTCHRALQIIARYVPSTPWFLMPILVEKFPFVRKSERTLECYVHNLLRISVYFPTLR
HEILELIIEKLLKLDVNASRQGIEDAEETATQTCGGTDSTEGLFNMDEDEETEHETKAGPERLDQMVHPV
AERLDILMSLVLSYMKDVCYVDGKVDNGKTKDLYRDLINIFDKLLLPTHASCHVQFFMFYLCSFKLGFAE
AFLEHLWKKLQDPSNPAIIRQAAGNYIGSFLARAKFIPLITVKSCLDLLVNWLHIYLNNQDSGTKAFCDV
ALHGPFYSACQAVFYTFVFRHKQLLSGNLKEGLQYLQSLNFERIVMSQLNPLKICLPSVVNFFAAITNKY
QLVFCYTIIERNNRQMLPVIRSTAGGDSVQICTNPLDTFFPFDPCVLKRSKKFIDPIYQVWEDMSAEELQ
EFKKPMKKDIVEDEDDDFLKGEVPQNDTVIGITPSSFDTHFRSPSSSVGSPPVLYMQPSPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH