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Report for CCDS73969.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73969.1 Public Homo sapiens 17 TP53 24 110 108 CCDS HistoryNCBI Gene:7157Re-query CCDS DB by CCDS ID:73969.1Re-query CCDS DB by GeneID:7157See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 73969.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000610292.4 ENSP00000478219.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610292.4Link to Ensembl Protein Viewer:ENSP00000478219.1Re-query CCDS DB by Nucleotide ID:ENST00000610292Re-query CCDS DB by Protein ID:ENSP00000478219
Original member Current member EBI ENST00000620739.4 ENSP00000481638.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000620739.4Link to Ensembl Protein Viewer:ENSP00000481638.1Re-query CCDS DB by Nucleotide ID:ENST00000620739Re-query CCDS DB by Protein ID:ENSP00000481638
Original member Current member EBI ENST00000619485.4 ENSP00000482537.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000619485.4Link to Ensembl Protein Viewer:ENSP00000482537.1Re-query CCDS DB by Nucleotide ID:ENST00000619485Re-query CCDS DB by Protein ID:ENSP00000482537
Original member Current member NCBI NM_001126118.2 NP_001119590.1 Accepted alive Link to Nucleotide Sequence:NM_001126118.2Link to Protein Sequence:NP_001119590.1Re-query CCDS DB by Nucleotide ID:NM_001126118Re-query CCDS DB by Protein ID:NP_001119590Link to BLAST:NP_001119590.1
Original member Current member NCBI NM_001276760.3 NP_001263689.1 Accepted alive Link to Nucleotide Sequence:NM_001276760.3Link to Protein Sequence:NP_001263689.1Re-query CCDS DB by Nucleotide ID:NM_001276760Re-query CCDS DB by Protein ID:NP_001263689Link to BLAST:NP_001263689.1
Original member Current member NCBI NM_001276761.3 NP_001263690.1 Accepted alive Link to Nucleotide Sequence:NM_001276761.3Link to Protein Sequence:NP_001263690.1Re-query CCDS DB by Nucleotide ID:NM_001276761Re-query CCDS DB by Protein ID:NP_001263690Link to BLAST:NP_001263690.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001119590.1 354 P04637-4 354 100% 0 0
NP_001263689.1 354 P04637-4 354 100% 0 0
NP_001263690.1 354 P04637-4 354 100% 0 0

Chromosomal Locations for CCDS 73969.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 7669609 7669690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7670609 7670715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7673535 7673608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7673701 7673837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7674181 7674290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7674859 7674971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7675053 7675236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 7675994 7676251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1065 nt):
ATGGATGATTTGATGCTGTCCCCGGACGATATTGAACAATGGTTCACTGAAGACCCAGGTCCAGATGAAG
CTCCCAGAATGCCAGAGGCTGCTCCCCCCGTGGCCCCTGCACCAGCAGCTCCTACACCGGCGGCCCCTGC
ACCAGCCCCCTCCTGGCCCCTGTCATCTTCTGTCCCTTCCCAGAAAACCTACCAGGGCAGCTACGGTTTC
CGTCTGGGCTTCTTGCATTCTGGGACAGCCAAGTCTGTGACTTGCACGTACTCCCCTGCCCTCAACAAGA
TGTTTTGCCAACTGGCCAAGACCTGCCCTGTGCAGCTGTGGGTTGATTCCACACCCCCGCCCGGCACCCG
CGTCCGCGCCATGGCCATCTACAAGCAGTCACAGCACATGACGGAGGTTGTGAGGCGCTGCCCCCACCAT
GAGCGCTGCTCAGATAGCGATGGTCTGGCCCCTCCTCAGCATCTTATCCGAGTGGAAGGAAATTTGCGTG
TGGAGTATTTGGATGACAGAAACACTTTTCGACATAGTGTGGTGGTGCCCTATGAGCCGCCTGAGGTTGG
CTCTGACTGTACCACCATCCACTACAACTACATGTGTAACAGTTCCTGCATGGGCGGCATGAACCGGAGG
CCCATCCTCACCATCATCACACTGGAAGACTCCAGTGGTAATCTACTGGGACGGAACAGCTTTGAGGTGC
GTGTTTGTGCCTGTCCTGGGAGAGACCGGCGCACAGAGGAAGAGAATCTCCGCAAGAAAGGGGAGCCTCA
CCACGAGCTGCCCCCAGGGAGCACTAAGCGAGCACTGCCCAACAACACCAGCTCCTCTCCCCAGCCAAAG
AAGAAACCACTGGATGGAGAATATTTCACCCTTCAGATCCGTGGGCGTGAGCGCTTCGAGATGTTCCGAG
AGCTGAATGAGGCCTTGGAACTCAAGGATGCCCAGGCTGGGAAGGAGCCAGGGGGGAGCAGGGCTCACTC
CAGCCACCTGAAGTCCAAAAAGGGTCAGTCTACCTCCCGCCATAAAAAACTCATGTTCAAGACAGAAGGG
CCTGACTCAGACTGA

Translation (354 aa):
MDDLMLSPDDIEQWFTEDPGPDEAPRMPEAAPPVAPAPAAPTPAAPAPAPSWPLSSSVPSQKTYQGSYGF
RLGFLHSGTAKSVTCTYSPALNKMFCQLAKTCPVQLWVDSTPPPGTRVRAMAIYKQSQHMTEVVRRCPHH
ERCSDSDGLAPPQHLIRVEGNLRVEYLDDRNTFRHSVVVPYEPPEVGSDCTTIHYNYMCNSSCMGGMNRR
PILTIITLEDSSGNLLGRNSFEVRVCACPGRDRRTEEENLRKKGEPHHELPPGSTKRALPNNTSSSPQPK
KKPLDGEYFTLQIRGRERFEMFRELNEALELKDAQAGKEPGGSRAHSSHLKSKKGQSTSRHKKLMFKTEG
PDSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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