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Report for CCDS75975.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75975.1 Public Homo sapiens X SLC35A2 24 110 108 CCDS HistoryNCBI Gene:7355Re-query CCDS DB by CCDS ID:75975.1Re-query CCDS DB by GeneID:7355See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75975.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376515.8 ENSP00000365698.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376515.8Link to Ensembl Protein Viewer:ENSP00000365698.3Re-query CCDS DB by Nucleotide ID:ENST00000376515Re-query CCDS DB by Protein ID:ENSP00000365698
Original member Current member NCBI NM_001282648.2 NP_001269577.1 Accepted alive Link to Nucleotide Sequence:NM_001282648.2Link to Protein Sequence:NP_001269577.1Re-query CCDS DB by Nucleotide ID:NM_001282648Re-query CCDS DB by Protein ID:NP_001269577Link to BLAST:NP_001269577.1

Chromosomal Locations for CCDS 75975.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48904590 48904892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48906392 48906543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48909814 48909996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48911859 48911877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (657 nt):
ATGAAGCTCTGTAGGGATGCTCACAGGCGCCTGAAGTACATATCCCTAGCTGTGCTGGTGGTCCAGAATG
CC
TCCCTCATCCTCAGCATCCGCTACGCCCGCACGTTGCCAGGGGACCGCTTCTTTGCCACCACTGCTGT
G
GTCATGGCGGAAGTGCTCAAAGGTCTCACCTGCCTGCTGCTGCTCTTCGCACAGAAGAGGGGTAACGTG
AAG
CACCTGGTTCTCTTCCTCCATGAGGCTGTCCTGGTGCAGTATGTGGACACGCTCAAGCTCGCAGTGC
CC
TCTCTCATCTACACCTTGCAGAATAACCTCCAGTATGTTGCCATCTCTAACCTACCAGCTGCCACTTT
C
CAGCCTTCCCCGAGGTGCAGCCAAAGCCATAGCCTCTGCCTCTGCCTCCGCCTCCGGGCCCTGCGTTCA
CCA
GCAGCCTCCCGGGCAGCCACCACCACCGCAGCTGTCTTCCCACCGTGGAGACCTCATCACGGAGCCC
TT
TCTGCCAAAGTCAGTGCTGGTGAAGTGAGGGCTGGCAGCAATGGGGGGACACAAGGGAGGGGGACTGG
G
GTGGAGGGTGTTGGGCATCTGCAGGACCCAAGTCGCCACCCTCCGGGGCCTGGCTCCTCTGGGTTTGGG
AGA
TGGTCTTTTCTCCCAGGTCACTGA


Translation (218 aa):
MKLCRDAHRRLKYISLAVLVVQNASLILSIRYARTLPGDRFFATTAVVMAEVLKGLTCLLLLFAQKRGNV
K
HLVLFLHEAVLVQYVDTLKLAVPSLIYTLQNNLQYVAISNLPAATFQ
PSPRCSQSHSLCLCLRLRALRS
P
AASRAATTTAAVFPPWRPHHGALSAKVSAGEVRAGSNGGTQGRGTGVEGVGHLQDPSRHPPGPGSSGFG
R
WSFLPGH




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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