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Report for CCDS79212.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79212.1 Public Mus musculus 13 Zfp825 23 108 98 CCDS HistoryNCBI Gene:235956Re-query CCDS DB by CCDS ID:79212.1Re-query CCDS DB by GeneID:235956See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79212.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000202645.3 ENSMUSP00000144128.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000202645.3Link to Ensembl Protein Viewer:ENSMUSP00000144128.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000202645Re-query CCDS DB by Protein ID:ENSMUSP00000144128
Original member NCBI NM_146231.1 NP_666343.1 Updated not alive Link to Nucleotide Sequence:NM_146231.1Link to Protein Sequence:NP_666343.1Re-query CCDS DB by Nucleotide ID:NM_146231Re-query CCDS DB by Protein ID:NP_666343
Current member NCBI NM_146231.2 NP_666343.1 Accepted alive Link to Nucleotide Sequence:NM_146231.2Link to Protein Sequence:NP_666343.1Re-query CCDS DB by Nucleotide ID:NM_146231Re-query CCDS DB by Protein ID:NP_666343Link to BLAST:NP_666343.1

Chromosomal Locations for CCDS 79212.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 74480517 74481150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 74482539 74482599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 74482817 74482943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 74493850 74493852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (825 nt):
ATGGATGCAGTGACTTATGATGATGTGCGTGTGAACTTCACTGAGGAAGAGTGGGATTTGCTGGATCCTT
CC
CAGAAAAGTCTCTATGAAGAGGTGATGCTGGAGACCTACCAGAACATCACTGCTATAGGCTACAAGTG
G
GAAGACCATCATATTGAAGAATATTGTCAAAGTTCTAGAAGACATGAAAGGCATGAAAGAATTCATATT
GGA
GAGAAACCCTATGAACGTAACCAATGTGGTAAAGCCTTTGCAAGTGACAATCATCTCCAAATACATA
AA
AGAACAAATACTGAAGAGAAACCTTATGAATGTAATCAATGTGGTAAAGCCTTTTCACAACACAGTAG
A
CTCCAATATCATAAAAGAAGTCATACTGGAGAGAAACCCTATAAATGTAATCAGTGTGGTAAAGCCTAT
GGA
CATCACAGTAGTCTCCAGTATCATAAAAGAAGACATACTGGAGAGAAACCTTATCACTGTAATCAAT
GT
GATAAAGCATTTTCAGAACACAGTAGTCTTGAATATCATAAAATAACACATCTTGGAGAGAAACCTTA
T
GAGTGTGATCAATGTGGTAAAGCCTTTGCATGGCAGTCTAGTCTCAATATACATAAAAGAACACATTCT
GGA
GAGAAACCTTATGAGTGTAATGAATGTGGTAAAGCCTTTACACATCATGCTAGTCTCCAAAGTCATA
AA
AGAATACATACTGGAGAGAAACCGTATCAGTGTGATCAGTGTGGTAAAGCATTTGCACATCAAACGAG
T
CTCCAATGCCATAAAAGAACACATACTGGAGAGAAACCTTATGAATGCAATTAA


Translation (274 aa):
MDAVTYDDVRVNFTEEEWDLLDPSQKSLYEEVMLETYQNITAIGYKWEDHHIEEYCQSSRRHERHERIHI
G
EKPYERNQCGKAFASDNHLQIHKRTNTEEKPYECNQCGKAFSQHSRLQYHKRSHTGEKPYKCNQCGKAY
G
HHSSLQYHKRRHTGEKPYHCNQCDKAFSEHSSLEYHKITHLGEKPYECDQCGKAFAWQSSLNIHKRTHS
G
EKPYECNECGKAFTHHASLQSHKRIHTGEKPYQCDQCGKAFAHQTSLQCHKRTHTGEKPYECN




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser