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Report for CCDS79305.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79305.1 Public Mus musculus 14 Ktn1 23 108 98 CCDS HistoryNCBI Gene:16709Re-query CCDS DB by CCDS ID:79305.1Re-query CCDS DB by GeneID:16709See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79305.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000190252.6 ENSMUSP00000140011.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190252.6Link to Ensembl Protein Viewer:ENSMUSP00000140011.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190252Re-query CCDS DB by Protein ID:ENSMUSP00000140011
Original member Current member NCBI NM_001293635.1 NP_001280564.1 Accepted alive Link to Nucleotide Sequence:NM_001293635.1Link to Protein Sequence:NP_001280564.1Re-query CCDS DB by Nucleotide ID:NM_001293635Re-query CCDS DB by Protein ID:NP_001280564Link to BLAST:NP_001280564.1

Chromosomal Locations for CCDS 79305.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 47663787 47664315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47667296 47667433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47670125 47670298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47672940 47673070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47674750 47674866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47676685 47676825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47683383 47683489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47684721 47684853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47686256 47686343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47689949 47690115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47690909 47690977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47692439 47692476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47693404 47693494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47693875 47693943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47694610 47694647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47694763 47694844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47695503 47695571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47700620 47700654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47701069 47701159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47701675 47701743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47703129 47703166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47704187 47704277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47704420 47704488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47705763 47705800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47706408 47706498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47707242 47707279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47708802 47708892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47710842 47710901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47712474 47712508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47714632 47714722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47720196 47720285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47723970 47724050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47724652 47724741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47724878 47724970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47725929 47726000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47726226 47726309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47730340 47730423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47733227 47733322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47734155 47734259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3813 nt):
ATGGAGCTGTACGAGTCAACGTATTTTGTTGTCCTCATCCCTTCAGTAGTTATTACCGTCATTTTCCTTT
TCTTCTGGCTTTTCATGAAAGAAACATTATATGATGAAGTTCTTGCAAAACAAAAAAGAGAGCAAAAGTT
GATTTCTACAAAAACAGATAAAAAGAAGGCAGAAAAGAAGAAGAATAAAAAGAAAGAAATCCAGAATGGG
ACCCTTCGTGAATCTGATTCTGAGCACGTGCCTCGGGACTTTAAATTATCCGATGCTTCTCCCGCGGAGG
ATGAACAGTTTGTACCTGCTCCACTGAATGTGGCAGAAACTTCCAGTAGTGTTAGGGAAAGAAAGAAGAA
GGAGAAGAAACAAAAACCTTCCCTTGAAGAGCAGGTCATCAAAGAAAGTGATGCATCAAAGATCCCAGGC
AAAAAAGTGGAACCTGTCCTAGTTACCAAACAGCCGGCCCCACCCCCACCCCTCGAAGCAGCTGCCTTGA
AGAAGAAAGCAGGGCAGAAGAAGTCTAAAAATGGAAGCGAAGAGCAAGATAAAAAGGTGGAAATGCTGAT
GGCACCTTCAAAAGAGCAGGACGTGTTGCTTTCCCATCAAGACACTAAGCAAGAAGGTGGACTAGGAAAG
AAGAAAGGCTTGTCAAAGAAGCAAAAGTCAGAAAATGTTGCAGTCTTGGTAGACGAGCCCCTTATTCATG
CAACTACTTACATTCCTTTGGATAATGCTAACTCAAATCTCATGATGGATAAGAGAGAAATTATTGATAT
GATTAAACCTGATCATGTTGAAGGAATCCAGAAATCTGGAACAAAAAAGCTGAAGATTGAAACTGACAAA
GAAAATGCTGAAGTGAAATTTAAAGATTTCCTTCTGTCCTTGAAGACTATGATGTTTTCTGAAGATGAAG
CTCTTTGTGTTGTAGACCTGCTGAAGGAAAAGTCTGGTGTGATAAAAGAAGCTTTAAAGAAGTCGAATAA
AGGAGAACTGAGTGGTCTTCTGCATCAACTTCAGGAGAAGGAGAGGCTGCTCTCTGCCATGAAGGAAGAT
GCTGCTGCCTCAAAGGAGCGCTGTAAGCAGTTGACTCAGGAAATGATGACAGAGAAAGAAAGAAGCAGTG
TTGTTATAGCAAGAATGAAAGATCGGATTGGAACACTAGAAAAGGAACACAATATATTTCAAAACAAAAT
GCATGCCAGTTACCAAGAGACTCAGCAGATGCAGATGAAGTTTCAGCAAGTTCAGGAACAAATGGAAGCA
GAGATAGCTCATTTGAAGCAGGAAAATGGTATCCTGAGAGATGCTGTCAGTAACACTACAAACCAACTGG
AAAGCAAGCAATCCGCAGAGCTAAATAAACTGCGCCAAGACTGTGGGAGGCTGGTGAGTGAACTGAACGA
GAAGACAGGAAAGCTGCAGCAAGAGGGAGTCCAGAAGAAGAATGCGGAGCAAGCTGCTACCCAGCTCAAG
GTTCAACTGCAAGAAGCTGAGAGGCGCTGGGAAGAAGTTCAGAGCTACATCAGGAAGAGGACGGCGGAGC
ATGAGGCTGCCCAGCAAGATTTACAAAGTAAATTTGTGGCCAAAGAAAATGAAGTCCAGAGTCTACATAG
TAAGCTCACAGACACCTTGGTATCAAAACAGCAATTGGAGCAAAGACTAATGCAGTTGATGGAATCCGAG
CAAAAGAGGGCGAGCAAAGAAGAGTCTCTGCAGATCCAAGTGCAGGATATTTTGGAACAAAACGAGGCTT
TGAAAGCTCAGATTCAACAATTCCATTCCCAGATAGCAGCTCAGACCTCCGCTTCAGTTCTAGCAGAAGA
ATTACATAAAGTGATTGCAGAAAAGGACAAGCAGCTAAAGCAGACTGAAGATTCATTAGCGAATGAACAG
GATCACTTAGCAAGCAAGGAGGAGGAGCTTAAGGATGTACAGAATATGAATTTCTTATTAAAAGCTGAAG
TGCAGAAATTGCAGGCCCTGGCTAATGAGCAGGCTGCTACCGCACATGAGGTGGAGAAGATGCAGAAGAG
TATTCACGTAAAGGAAGATAAAATAAGACTGCTTGAGGAGCAGCTGCAGCACGAAGTTGCCAGCAAAATG
GAAGAATTGAAGATTCTGAGTGAGCAGAATAAAGCATTACAGTCGGAAGTTCAGAAACTGCAGACCGCTG
TTTCTCAGCAGCCTAATAAAGATGTTGTGGAACAAATGGAAAAATGCATTCAAGAAAAAGATGAGAAGTT
AAGGACTGTGGAAGAATTACTGGAGACTGGACTCATTCAGGTGGCCACCAGAGAGGAGGAGCTGAGTGCC
ATAAGAACAGAGAACTCCACCCTGACCAGAGAAGTTCAAGAGTTGAAGGCTAAGCAGAGCGATCAGGTTT
CTTTTGTGTCTCTAATTGAAGATCTTAAGAGAGTGATCCATGAGAAAGATGGACAGATCAAGTCTGTGGA
AGAGCTTCTAGAAGTTGAACTTCTCAAAGTTGCAAATAAGGAGAAAACTGTCCAGGCTTTGAAACAGGAA
ATAGAGGTTCTAAAAGAAGAAATAGGAAATGCCCAGCTTGAAAAGGCTCACCAGCTGTCTGTCACTTCTC
AAGTCCAGGAGCTGCAGAACTTATTAAGAGGCAAGGAAGAGCAGGTGAACAGCATGAAGGCTGCCTTAGA
AGACAGGGACAGAGACCTGAGAGGGAGAGGGACGTGCGCACAGGTGTGTTCGACACCACAATTTGAAGAA
CTTGAAAGTGTGTTGAAAGAAAAGGACAATGAAATTAAGAGAATAGAAGTTAAATTAAAGGACACGGAGA
GTGATGTTTCTAAGATGTCAGAGCTATTAAAGGAGGTACAAGAGGAAAATAAATTCCTTAAGTGCCAGCT
CAGTCACCAGAAGCACCAACAGGCATCTTTTCCCTCTCAGGAAGAATTACAAACAGTAATTTCAGAAAAA
GAGAAAGAAATAACTGATCTCTGCAATGAGTTAGAGTCTTTGAAGAATGCTGTTGAACACCAGAGGAAGA
AAAACAATGAAAGACGGCAACACGTGGAAGCTATTGAGTTAGAGTCCAAAGACCTTCTGAAGAGGTTATT
TCCAACGGTGTCTGTCCCTTCTAATTTGAATTACAGTGAATGGTTGCGTGGCTTTGAAAAGAAGGCAAAA
GCGTGCGTAGCTGGAACTTCAGACGCAGAGGCGGTCAAGGTTTTGGAGCACAGATTGAAAGAAGCTAGTG
AGATGCACACTTTGCTACAGCTGGAATGTGAAAAATACAAGTCGGTCCTTGCAGAAACAGAAGGGATTTT
GCAAAAACTTCAGCGAAGTGTGGAGCAAGAAGAAAGTAAATGGAAAATTAAAGCTGACGAGTCTCAAAGG
ATGATTAAACAGATGCAGTCCTCCTTCACAGCCTCAGAGCGAGAGCTAGAGCGACTAAGACAAGAAAACA
AAGATATGGAGAATCTGAGAAGAGAAAGAGAGCATTTGGAAATGGAGCTAGAGAAGGCCGAGATGGAGCG
ATCGACTTACGTGATGGAAGTCAGAGAGCTCAAGACACAGTTAAATGAAACACACTCAAAACTTCAAAAT
GAACAAACGGAGAGAAAGAAGGTAGCTGATGATTTGCATAAGGCTCAACAGTCCCTGAACTCTATCCACT
CAAAAATCTCACTGAAAGCTGCTGGAGACACTGTTGTTATTGAGAACAGTGATATTTCCCCAGAAATGGA
GTCTCCTGAGAAAGAGACGATGTCTGTAAGTCTCAATCAGACTGTGACACAGTTACAGCAATTGCTTCAG
GAAGTAAATCAACAACTCACAAAGGAGACATAA

Translation (1270 aa):
MELYESTYFVVLIPSVVITVIFLFFWLFMKETLYDEVLAKQKREQKLISTKTDKKKAEKKKNKKKEIQNG
TLRESDSEHVPRDFKLSDASPAEDEQFVPAPLNVAETSSSVRERKKKEKKQKPSLEEQVIKESDASKIPG
KKVEPVLVTKQPAPPPPLEAAALKKKAGQKKSKNGSEEQDKKVEMLMAPSKEQDVLLSHQDTKQEGGLGK
KKGLSKKQKSENVAVLVDEPLIHATTYIPLDNANSNLMMDKREIIDMIKPDHVEGIQKSGTKKLKIETDK
ENAEVKFKDFLLSLKTMMFSEDEALCVVDLLKEKSGVIKEALKKSNKGELSGLLHQLQEKERLLSAMKED
AAASKERCKQLTQEMMTEKERSSVVIARMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQEQMEA
EIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLK
VQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESE
QKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQ
DHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASKM
EELKILSEQNKALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSA
IRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQE
IEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVCSTPQFEE
LESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEK
EKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRLFPTVSVPSNLNYSEWLRGFEKKAK
ACVAGTSDAEAVKVLEHRLKEASEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKIKADESQR
MIKQMQSSFTASERELERLRQENKDMENLRREREHLEMELEKAEMERSTYVMEVRELKTQLNETHSKLQN
EQTERKKVADDLHKAQQSLNSIHSKISLKAAGDTVVIENSDISPEMESPEKETMSVSLNQTVTQLQQLLQ
EVNQQLTKET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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