NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS7991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7991.1 Public Homo sapiens 11 MS4A15 24 110 108 CCDS HistoryNCBI Gene:219995Re-query CCDS DB by CCDS ID:7991.1Re-query CCDS DB by GeneID:219995See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7991.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337911.8 ENSP00000338692.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337911.8Link to Ensembl Protein Viewer:ENSP00000338692.4Re-query CCDS DB by Nucleotide ID:ENST00000337911Re-query CCDS DB by Protein ID:ENSP00000338692
Original member Current member NCBI NM_152717.3 NP_689930.1 Accepted alive Link to Nucleotide Sequence:NM_152717.3Link to Protein Sequence:NP_689930.1Re-query CCDS DB by Nucleotide ID:NM_152717Re-query CCDS DB by Protein ID:NP_689930Link to BLAST:NP_689930.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689930.1 147 Q8N5U1-2 147 100% 0 0

Chromosomal Locations for CCDS 7991.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 60767587 60767655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60771291 60771347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60773392 60773484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60773837 60773950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60775605 60775715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGGTTCGCCGCGGCCACGTGGGCATCTTCTTCATCGAGGGCGGCGTCCCCTTCTGGGGAGGAGCCTGCT
TCATCATCTCCGGATCCCTCTCAGTGGCAGCCGAGAAGAACCACACCAGTTGCCTGGTGAGGAGCAGCCT
GGGCACCAACATCCTCAGCGTCATGGCGGCCTTTGCTGGGACAGCCATTCTGCTCATGGATTTTGGTGTT
ACCAACCGGGATGTGGACAGGGGCTATCTGGCCGTGCTTACTATCTTCACTGTCCTGGAGTTCTTCACAG
CGGTCATTGCCATGCACTTCGGGTGCCAAGCCATCCATGCCCAGGCCAGTGCACCTGTGATCTTCCTGCC
AAACGCCTTCAGCGCAGACTTCAACATCCCCAGCCCGGCAGCCTCTGCGCCCCCTGCCTATGACAATGTG
GCATATGCCCAAGGAGTCGTCTGA

Translation (147 aa):
MVRRGHVGIFFIEGGVPFWGGACFIISGSLSVAAEKNHTSCLVRSSLGTNILSVMAAFAGTAILLMDFGV
TNRDVDRGYLAVLTIFTVLEFFTAVIAMHFGCQAIHAQASAPVIFLPNAFSADFNIPSPAASAPPAYDNV
AYAQGVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH