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Report for CCDS81378.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81378.1 Public Homo sapiens 1 OAZ3 24 110 108 CCDS HistoryNCBI Gene:51686Re-query CCDS DB by CCDS ID:81378.1Re-query CCDS DB by GeneID:51686See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)


Attributes
Non-AUG initiation codon
Ribosomal slippage (translational frameshift)

Sequence IDs included in CCDS 81378.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400999.7 ENSP00000383784.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400999.7Link to Ensembl Protein Viewer:ENSP00000383784.3Re-query CCDS DB by Nucleotide ID:ENST00000400999Re-query CCDS DB by Protein ID:ENSP00000383784
Original member Current member NCBI NM_016178.2 NP_057262.2 Accepted alive Link to Nucleotide Sequence:NM_016178.2Link to Protein Sequence:NP_057262.2Re-query CCDS DB by Nucleotide ID:NM_016178Re-query CCDS DB by Protein ID:NP_057262Link to BLAST:NP_057262.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057262.2 235 Q9UMX2-1 235 100% 0 0

Chromosomal Locations for CCDS 81378.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151766722 151766888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151767163 151767223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151767225 151767299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151768058 151768233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151770172 151770257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151771077 151771219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. This works on the replacement symbol in the Translation Exceptions section also.

Translation Exceptions:
replace the symbol L (codon CTG) with M at amino acid position 1

Nucleotide Sequence (708 nt):
CTGCCTTGTAAGAGGTGTCGCCCCTCTGTCTACTCCCTTTCTTATATCAAGAGGGGAAAAACACGTAACT
ACCTCTACCCGATCTGGTCACCATACGCCTATTACCTTTACTGTTACAAGTACCGGATCACTCTCCGGGA
GAAGATGCTGCCTCGTTGTTATAAAAGCATCACTTATAAGGAAGAGGAGGACTTGACACTCCAGCCCCGT
TCCTGCCTCCAGTGCTCCGAGTCCCTAGTAGGCCTCCAGGAGGGCAAAAGCACCGAGCAGGGTAACCACG
ACCAGCTTAAAGAACTGTATTCGGCTGGGAACTTGACGGTGCTGGCTACTGACCCCCTGCTCCACCAGGA
CCCAGTACAGTTAGACTTTCACTTCCGCCTTACCTCCCAGACCTCTGCCCATTGGCACGGCCTTCTCTGT
GACCGTCGACTCTTCCTGGATATCCCATATCAGGCCTTGGATCAAGGCAACCGGGAAAGTTTGACTGCAA
CCCTGGAGTACGTGGAAGAGAAGACAAATGTGGACTCTGTGTTTGTGAACTTCCAGAATGATCGGAACGA
CAGAGGTGCCCTGCTGCGGGCCTTCAGCTACATGGGCTTTGAGGTGGTCAGACCAGATCACCCTGCCCTC
CCTCCCTTGGACAATGTCATCTTTATGGTGTATCCCCTTGAAAGGGATGTTGGCCACCTGCCCAGTGAGC
CTCCTTGA

Translation (235 aa):
MPCKRCRPSVYSLSYIKRGKTRNYLYPIWSPYAYYLYCYKYRITLREKMLPRCYKSITYKEEEDLTLQPR
SCLQCSESLVGLQEGKSTEQGNHDQLKELYSAGNLTVLATDPLLHQDPVQLDFHFRLTSQTSAHWHGLLC
DRRLFLDIPYQALDQGNRESLTATLEYVEEKTNVDSVFVNFQNDRNDRGALLRAFSYMGFEVVRPDHPAL
PPLDNVIFMVYPLERDVGHLPSEPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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