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Report for CCDS85264.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85264.1 Public Mus musculus 7 Arhgap33 23 108 98 CCDS HistoryNCBI Gene:233071Re-query CCDS DB by CCDS ID:85264.1Re-query CCDS DB by GeneID:233071See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85264.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000207858.1 ENSMUSP00000146571.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207858.1Link to Ensembl Protein Viewer:ENSMUSP00000146571.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207858Re-query CCDS DB by Protein ID:ENSMUSP00000146571
Original member Current member NCBI NM_001289670.1 NP_001276599.1 Accepted alive Link to Nucleotide Sequence:NM_001289670.1Link to Protein Sequence:NP_001276599.1Re-query CCDS DB by Nucleotide ID:NM_001289670Re-query CCDS DB by Protein ID:NP_001276599Link to BLAST:NP_001276599.1

Chromosomal Locations for CCDS 85264.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30522588 30523846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30523944 30524588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30525955 30526029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30526114 30526259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30526347 30526500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30527142 30527287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30528280 30528387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30528470 30528552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30528654 30528798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30529716 30529818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30529895 30530047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30530136 30530195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30530276 30530342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30530425 30530502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30530586 30530708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30531524 30531616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30532079 30532216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30532320 30532400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30532760 30532844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30532935 30533032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30534926 30534931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3846 nt):
ATGGTGGCCCGCAGCACTGACAGCCTGGATGGCCCAGGGGAGGGCTCAGTGCAGCCCGTACCCACTACTG
GGGGGCCGGGTACAAAGGGGAAGCCTGGGAAGAGGCTCTCAGCTCCTCGAGGCCCTTTCCCCCGGCTGGC
TGACTGTGCCCATTTCCACTATGAGAATGTTGACTTTGGCCACATTCAGCTCCTGCTGTCTCCAGAGCGT
GAGGGCCCCAGCCTCTCTGGAGAAAATGAGCTGGTCTTTGGGGTACAGGTGACCTGTCAGGGCCGCTCCT
GGCCAGTCCTCCGGAGCTATGACGATTTCCGTTCTCTGGATGCCCATCTCCACCGGTGCATATTTGACCG
GAGATTTTCCTGCCTCCCAGAGCTCCCTCCACCTCCAGAGGGTACCAGGGCTGCCCAGATGCTGGTACCG
CTGCTGCTGCAGTACCTGGAGACCCTGTCAGGACTGGTGGACAGTAACCTCAACTGTGGACCTGTGCTCA
CTTGGATGGAGCTGGACAACCATGGCCGGCGCCTGCTCCTCAGTGAGGAAGCCTCCCTCAATATCCCTGC
TGTGGCTGCTGCCCACGTGGTCAAGCGGTACACTGCCCAGGCGCCAGATGAGCTGTCCTTTGAGGTGGGA
GACATTGTCTCAGTGATCGACATGCCACCTACAGAGGATCGGAGCTGGTGGCGGGGCAAACGGGGCTTCC
AGGTTGGTTTCTTCCCCAGTGAGTGTGTGGAACTCTTCACGGAGAGGCCAGGGCCTGGCCTAAAGGCAGA
TGCTGACAGTCCCCTGTGTGGCATCCCAGCTCCCCAGGGCATCTCTTCTCTGACCTCAGCTGTGCCCCGG
CCACGTGGGAAGCTGGCAGGACTCCTCCGCACCTTCATGCGCTCTCGTCCTTCTCGCCAGCGGCTGCGCC
AACGGGGAATCCTGCGGCAGAGGGTGTTTGGTTGTGATCTTGGAGAGCACCTCAGCAACTCAGGCCAAGA
CGTGCCCCAAGTGCTGCGCTGCTGCTCTGAGTTTATTGAGGCCCATGGTGTGGTGGATGGAATCTACAGG
CTCTCTGGCGTGTCCTCCAACATCCAGAGGCTTCGGCATGAGTTTGATAGTGAGAGGATCCCTGAGCTGT
CTGGCCCCGCCTTCCTACAAGATATCCACAGTGTGTCCTCCCTCTGCAAGCTCTACTTCCGGGAACTGCC
CAACCCCTTGCTCACCTACCAGCTCTATGGGAAGTTCAGTGAGGCTATGTCAGTGCCTGGGGAGGAAGAA
CGCCTAGTGCGAGTGCATGACGTCATCCAGCAGCTGCCTCCACCACACTACAGGACCCTGGAGTACCTGC
TGAGGCACCTGGCCCGCATGGCAAGACACAGCGCTAACACCAGCATGCATGCCCGCAACCTGGCCATTGT
CTGGGCACCCAACCTGCTACGGTCTATGGAACTGGAGTCGGTGGGGCTGGGTGGGGCAGCCGCCTTCCGG
GAGGTCCGGGTGCAGTCGGTGGTGGTGGAGTTCCTGCTTACCCACGTGGAGGTTCTGTTCAGCGATACGT
TCACCTCTGCTGGCCTGGACCCTGCAGGTCGCTGCCTCCTTCCCAGACCCAAGTCCCTTGCGGGGAGCAG
TCCCTCCACTCGCCTGCTAACACTGGAAGAAGCCCAGGCACGAACTCAGGGCCGTCTTGGAACACCTACA
GAGCCCACGACTCCTAAGACGCCAGCCTCACCAGTGGAAAGGAGGAAAAGAGAGAGGGCGGAGAAACAAA
GGAAGCCAGGAGGTAGCAGCTGGAAGACATTCTTTGCTCTGGGGCGGGGCCCCAGCATACCCCGGAAGAA
GCCGCTGCCATGGCTGGGTGGCAGCCGAGCCCCACCACAGCCTTCAGGCAGCAGACCTGACACTGTCACG
CTGAGATCTGCCAAAAGTGAGGAGTCTCTGTCATCCCAGGCCAGCGGGGCTGGCCTCCAGAGGCTGCACC
GGCTGCGACGACCCCACTCCAGCAGCGATGCTTTTCCCGTGGGCCCAGCACCTGCTGGCTCTTGCGAGAG
CTTGTCCTCTTCTTCTTCCTCTTCTTCCTCTTCCTCCTCCTCCTCCTCCTCAGAGTCTTCAGCAGGTGGC
CTGGGGCCACTCTCTGGCTCCCCCTCACACCGCACCTCAGCCTGGCTAGATGATGGCGATGATCTGGATT
TCAGTCCACCCCGCTGTCTGGAAGGACTTCGGGGACTTGACTTTGATCCCCTTACCTTTCGCTGCAGCAG
CCCCACCCCAGGGGACCCTGCACCTCCTGCCAGCCCAGCACCTCCAGCCTCAGCCTCTGCCTTCCCACCT
CGGGCAACCCCACAGGCTCTGTCACCCCATGGACCCACTAAGCCTGCTTCACCCACTGCCCTGGACATCT
CAGAGCCCCTGGCTGTATCAGTACCACCTGCTGTCCTGGAACTACTGGGAGCTGGAGGAACGCCTGCCTC
AGCCACCCCAACACCGGCTCTCAGCCCTCATCTCATCCCCCTGCTGCTGCGTGGAGCTGAGGCCCAGCTA
AGTGACACCTGTCAGCAGGAGATCAGCAGCAAGCTAGCACCAACCCGGGGAGCTCCAGGCCAGCAAAGTC
CTGGCGGCATGGATTCACCGTTATTGCCCCCACCCTTGCCTCTGCTGCGCCCTGGTGGGGCTCCGCCCCC
TCCCCCCAAGAACCCAGCTCGTCTCATGGCCCTGGCCTTGGCTGAGCGAGCTCAGCAGGTAGCAGAGCAA
CAGAGCCAACAAGAGCAGGGGGGCACCCCACCTGCTCCCCACTCCCCCTTTCGACGCTCTCTGTCCCTAG
AGGTGGGTGGGGAGCCTGTGGGGACTTCAGGGAGTGGGATACACCCTCCCTCCTTAGCTCACCCAGGTGC
CTGGGCTCCAGGTCCCCCACCTTACCTCCCAAGGCAACAGAGTGATGGGAGCCTGGTAAGAAGCCAGCGG
CCCTTGGGGACCTCAAGGAGAAGTCCCAGAGGGCCTTCCCAGGTCAGTGCCCATCTCAGGGCAAGCGGGG
CTTACAGGGATGCTCCAGAGATGGCAGCCCAGTCACCATGTTCTGTCCCCTCACAGGGTTCTAACCCCAG
CTTCTTCTCAACCCCCCGAGAGTGTTTGCCACCTTTCCTTGGCGTCCCCAAACAAGGCTTGTACTCTCTG
GGACCCCCATCCTTCCCACCTAGCTCTCCAGCCCCAGTCTGGAGGAACTCTCTGGGTGCCCCCTCAGCAT
TGGACAGGGGAGAGAATCTGTACTATGAAATTGGGGTAGGGGAGGGGACCTCCTACTCAGGCCCCAGCCG
GTCCTGGAGTCCGTTTCGCTCCATGCCTCCCGACAGGCATAATGCCTCCTATGGTATGCTTGGCCAGTCA
CCACCGCTCCACAGGTCCCCTGATTTCCTGCTCAGCTACCCGCCTCCCCCCTCCTGCTTTCCCCCAGAGC
ACCTTACCCACTCAGTTTCACAGCGCCTTGCCCGGCGCCCTACCCGTCCTGAGCCCCTCTATGTCAACCT
AGCCCTAGGGCCCAGGGGCCCTTCACCTGCCTCTTCTTCCTCTTCCTCTCCTCCTGCCCACCCCAGGAGC
CGGTCAGATCCTGGGCCTCCTGTTCCCCGCCTCCCTCAGAAACAGCGGGCTCCTTGGGGTCCACATACTC
CCCATCGGGTGCCTGGACCTTGGGGTTCCCCCGAACCTTTTCTGCTCTATAGGCCAGCTCCACCATCCTA
TGGGAGGGGAGGGGAGGTCCGAGGATCCTTGTACAGAAATGGAGGACATAGAGGAGAGGGGGCTGGTCCC
CCTCCTCCTTACCCCACACCCAGCTGGTCCTTACATTCAGAAGGACAGACCAGAAGTTACTGCTGA

Translation (1281 aa):
MVARSTDSLDGPGEGSVQPVPTTGGPGTKGKPGKRLSAPRGPFPRLADCAHFHYENVDFGHIQLLLSPER
EGPSLSGENELVFGVQVTCQGRSWPVLRSYDDFRSLDAHLHRCIFDRRFSCLPELPPPPEGTRAAQMLVP
LLLQYLETLSGLVDSNLNCGPVLTWMELDNHGRRLLLSEEASLNIPAVAAAHVVKRYTAQAPDELSFEVG
DIVSVIDMPPTEDRSWWRGKRGFQVGFFPSECVELFTERPGPGLKADADSPLCGIPAPQGISSLTSAVPR
PRGKLAGLLRTFMRSRPSRQRLRQRGILRQRVFGCDLGEHLSNSGQDVPQVLRCCSEFIEAHGVVDGIYR
LSGVSSNIQRLRHEFDSERIPELSGPAFLQDIHSVSSLCKLYFRELPNPLLTYQLYGKFSEAMSVPGEEE
RLVRVHDVIQQLPPPHYRTLEYLLRHLARMARHSANTSMHARNLAIVWAPNLLRSMELESVGLGGAAAFR
EVRVQSVVVEFLLTHVEVLFSDTFTSAGLDPAGRCLLPRPKSLAGSSPSTRLLTLEEAQARTQGRLGTPT
EPTTPKTPASPVERRKRERAEKQRKPGGSSWKTFFALGRGPSIPRKKPLPWLGGSRAPPQPSGSRPDTVT
LRSAKSEESLSSQASGAGLQRLHRLRRPHSSSDAFPVGPAPAGSCESLSSSSSSSSSSSSSSSSESSAGG
LGPLSGSPSHRTSAWLDDGDDLDFSPPRCLEGLRGLDFDPLTFRCSSPTPGDPAPPASPAPPASASAFPP
RATPQALSPHGPTKPASPTALDISEPLAVSVPPAVLELLGAGGTPASATPTPALSPHLIPLLLRGAEAQL
SDTCQQEISSKLAPTRGAPGQQSPGGMDSPLLPPPLPLLRPGGAPPPPPKNPARLMALALAERAQQVAEQ
QSQQEQGGTPPAPHSPFRRSLSLEVGGEPVGTSGSGIHPPSLAHPGAWAPGPPPYLPRQQSDGSLVRSQR
PLGTSRRSPRGPSQVSAHLRASGAYRDAPEMAAQSPCSVPSQGSNPSFFSTPRECLPPFLGVPKQGLYSL
GPPSFPPSSPAPVWRNSLGAPSALDRGENLYYEIGVGEGTSYSGPSRSWSPFRSMPPDRHNASYGMLGQS
PPLHRSPDFLLSYPPPPSCFPPEHLTHSVSQRLARRPTRPEPLYVNLALGPRGPSPASSSSSSPPAHPRS
RSDPGPPVPRLPQKQRAPWGPHTPHRVPGPWGSPEPFLLYRPAPPSYGRGGEVRGSLYRNGGHRGEGAGP
PPPYPTPSWSLHSEGQTRSYC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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