NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS85453.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
85453.1 Public Mus musculus 7 Urah 23 108 98 CCDS HistoryNCBI Gene:76974Re-query CCDS DB by CCDS ID:85453.1Re-query CCDS DB by GeneID:76974See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 85453.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106050.7 ENSMUSP00000101665.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106050.7Link to Ensembl Protein Viewer:ENSMUSP00000101665.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000106050Re-query CCDS DB by Protein ID:ENSMUSP00000101665
Original member Current member NCBI NM_001347605.1 NP_001334534.1 Accepted alive Link to Nucleotide Sequence:NM_001347605.1Link to Protein Sequence:NP_001334534.1Re-query CCDS DB by Nucleotide ID:NM_001347605Re-query CCDS DB by Protein ID:NP_001334534Link to BLAST:NP_001334534.1

Chromosomal Locations for CCDS 85453.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140835199 140835258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140835612 140835751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140836747 140836882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140837686 140837775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (426 nt):
ATGAGTTCCAGGACCGCCCCGCGGCTGATGACGCTCCAGAGACACTTAGGCTGGCCGCAGGCTGGCAACA
TGGCTACCGAGAGCAGTCCCCTGACTACTCACGTTCTAGACACTGCCTCAGGGCTCCCTGCCCAAGGCCT
CTGCCTCCGGCTGTCCCGCCTGGAGGCCCCCTGCCAGCAGTGGATGGAGCTGAGGACAAGCTACACAAAC
CTGGACGGTCGCTGTCCTGGGCTCCTGACACCAAGCCAGATAAAGCCAGGCACCTATAAGCTGTTCTTCG
ACACAGAGCGCTACTGGAAAGAGCGGGGTCAAGAGAGCTTTTACCCCTATGTAGAGGTGGTTTTCACTAT
TACAAAGGAGACCCAGAAGTTCCACGTACCTCTGCTGCTGAGCCCATGGTCCTACACCACCTACCGGGGG
AGTTAA

Translation (141 aa):
MSSRTAPRLMTLQRHLGWPQAGNMATESSPLTTHVLDTASGLPAQGLCLRLSRLEAPCQQWMELRTSYTN
LDGRCPGLLTPSQIKPGTYKLFFDTERYWKERGQESFYPYVEVVFTITKETQKFHVPLLLSPWSYTTYRG
S


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH