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Report for CCDS87234.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87234.1 Public Homo sapiens 4 COQ2 24 110 108 CCDS HistoryNCBI Gene:27235Re-query CCDS DB by CCDS ID:87234.1Re-query CCDS DB by GeneID:27235See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87234.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000647002.2 ENSP00000495761.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000647002.2Link to Ensembl Protein Viewer:ENSP00000495761.2Re-query CCDS DB by Nucleotide ID:ENST00000647002Re-query CCDS DB by Protein ID:ENSP00000495761
Original member Current member NCBI NM_001358921.2 NP_001345850.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001358921.2Link to Protein Sequence:NP_001345850.1Re-query CCDS DB by Nucleotide ID:NM_001358921Re-query CCDS DB by Protein ID:NP_001345850Link to BLAST:NP_001345850.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001345850.1 371 Q96H96-1 371 100% 0 0

Chromosomal Locations for CCDS 87234.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 83264199 83264363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83267586 83267774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83269860 83269993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83272087 83272172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83273496 83273617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83278948 83279114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 83284512 83284764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1116 nt):
ATGCTGGGCTCGCGAGCCGCGGGGTTCGCGCGGGGCCTGCGGGCTGTGGCACTGGCGTGGCTGCCGGGCT
GGCGGGGCCGCTCCTTCGCCCTGGCGCGTGCGGCAGGCGCGCCCCACGGTGGTGACTTGCAGCCCCCCGC
CTGTCCCGAGCCGCGCGGGCGCCAGCTCAGTTTGTCCGCGGCGGCGGTGGTGGACTCTGCGCCCCGCCCC
CTGCAGCCGTACTTGCGCCTCATGCGGTTGGACAAGCCCATTGGAACCTGGCTTCTGTATTTACCATGTA
CCTGGAGCATTGGTTTGGCAGCTGAACCAGGTTGTTTTCCAGATTGGTACATGCTCTCCCTCTTTGGCAC
TGGAGCTATTCTGATGCGTGGAGCAGGCTGTACTATTAATGACATGTGGGACCAGGACTATGATAAAAAG
GTTACAAGAACAGCCAATCGTCCAATAGCCGCTGGAGACATTTCAACTTTTCAGTCCTTTGTTTTTCTTG
GGGGACAGCTAACCCTGGCACTGGGTGTTCTTCTGTGTCTAAATTACTACAGTATAGCTCTGGGAGCAGG
ATCCTTACTTCTTGTCATCACCTACCCACTAATGAAAAGAATTTCATACTGGCCTCAACTAGCCTTGGGC
TTGACATTTAATTGGGGAGCGTTACTTGGATGGTCTGCTATCAAGGGTTCCTGTGATCCATCTGTTTGCC
TGCCTCTTTATTTTTCTGGAGTTATGTGGACACTAATATATGATACTATTTATGCCCATCAGGACAAAAG
AGATGATGTTTTGATTGGTCTTAAGTCAACGGCTCTGCGGTTCGGAGAAAATACCAAGCCGTGGCTCAGC
GGCTTCAGTGTTGCAATGCTGGGGGCACTGAGCCTAGTGGGTGTGAACAGTGGACAGACTGCTCCCTACT
ACGCTGCCCTGGGTGCTGTAGGAGCCCATCTGACTCACCAGATTTACACTCTAGACATCCACAGACCTGA
GGATTGTTGGAATAAATTTATCTCCAACCGAACACTGGGACTAATAGTTTTTTTAGGGATTGTCCTTGGG
AATTTGTGGAAAGAAAAGAAGACAGACAAAACAAAGAAGGGTATAGAGAATAAAATAGAAAATTAA

Translation (371 aa):
MLGSRAAGFARGLRAVALAWLPGWRGRSFALARAAGAPHGGDLQPPACPEPRGRQLSLSAAAVVDSAPRP
LQPYLRLMRLDKPIGTWLLYLPCTWSIGLAAEPGCFPDWYMLSLFGTGAILMRGAGCTINDMWDQDYDKK
VTRTANRPIAAGDISTFQSFVFLGGQLTLALGVLLCLNYYSIALGAGSLLLVITYPLMKRISYWPQLALG
LTFNWGALLGWSAIKGSCDPSVCLPLYFSGVMWTLIYDTIYAHQDKRDDVLIGLKSTALRFGENTKPWLS
GFSVAMLGALSLVGVNSGQTAPYYAALGAVGAHLTHQIYTLDIHRPEDCWNKFISNRTLGLIVFLGIVLG
NLWKEKKTDKTKKGIENKIEN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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