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Report for CCDS8825.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8825.1 Public Homo sapiens 12 KRT84 24 110 108 CCDS HistoryNCBI Gene:3890Re-query CCDS DB by CCDS ID:8825.1Re-query CCDS DB by GeneID:3890See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8825.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257951.3 ENSP00000257951.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257951.3Link to Ensembl Protein Viewer:ENSP00000257951.3Re-query CCDS DB by Nucleotide ID:ENST00000257951Re-query CCDS DB by Protein ID:ENSP00000257951
Original member Current member NCBI NM_033045.4 NP_149034.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033045.4Link to Protein Sequence:NP_149034.2Re-query CCDS DB by Nucleotide ID:NM_033045Re-query CCDS DB by Protein ID:NP_149034Link to BLAST:NP_149034.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149034.2 600 Q9NSB2 600 100% 0 0

Chromosomal Locations for CCDS 8825.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 52378034 52378380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52379876 52379907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52380363 52380583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52381080 52381205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52381361 52381525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52382437 52382532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52383005 52383065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52383590 52383798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 52385040 52385585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1803 nt):
ATGTCTTGCCGCTCCTACCGAGTCAGCTCTGGTCACCGGGTGGGCAACTTCAGCTCTTGTTCAGCAATGA
CACCACAGAACCTGAATCGCTTCCGGGCCAACTCTGTCTCCTGTTGGAGTGGGCCTGGATTCCGGGGCCT
TGGCAGCTTTGGTAGTCGGAGTGTCATCACCTTTGGATCGTACTCACCCCGGATAGCAGCTGTAGGCTCT
CGGCCCATCCACTGTGGAGTCCGCTTTGGTGCTGGCTGTGGGATGGGTTTTGGTGATGGGAGAGGTGTTG
GTCTGGGGCCTAGGGCTGACAGCTGTGTTGGTCTGGGCTTTGGAGCTGGCAGTGGCATTGGCTATGGCTT
TGGTGGCCCTGGCTTTGGTTACAGAGTTGGAGGGGTTGGAGTCCCAGCAGCCCCATCTATCACAGCTGTG
ACTGTGAACAAGAGCCTACTGACCCCCCTCAACCTGGAGATTGACCCCAATGCCCAGAGGGTGAAGAAGG
ATGAGAAGGAGCAAATCAAGACCCTCAACAACAAGTTTGCCTCCTTCATTGACAAGGTTCGGTTCCTAGA
GCAGCAGAATAAGCTCCTAGAGACCAAGTGGAGCTTCCTCCAAGAGCAGAAATGTATCAGGAGCAATCTG
GAGCCACTCTTCGAGAGCTACATCACCAACCTGCGGAGGCAGTTGGAGGTGCTGGTCAGTGATCAGGCCC
GGCTCCAGGCTGAGAGGAACCACCTGCAGGATGTCCTAGAGGGCTTCAAGAAGAAGTATGAAGAGGAAGT
GGTATGTCGGGCCAATGCTGAGAATGAGTTTGTGGCTCTGAAGAAGGATGTGGATGCAGCTTTCATGAAC
AAGTCTGATCTCGAGGCCAACGTGGATACCCTAACTCAGGAAATTGACTTTCTAAAAACGCTTTACATGG
AGGAAATCCAGTTGCTGCAGTCGCACATCTCAGAGACGTCGGTCATTGTGAAGATGGACAACAGCCGTGA
CCTGAACCTTGATGGGATCATTGCTGAGGTCAAGGCCCAGTATGAGGAGGTGGCCAGGCGCAGCCGGGCT
GATGCTGAGGCCTGGTACCAGACCAAGTATGAAGAGATGCAGGTGACAGCTGGCCAACACTGTGACAACC
TGCGCAACATACGGAACGAGATCAACGAACTGACCCGCCTGATCCAGAGGCTTAAGGCAGAGATTGAGCA
CGCCAAGGCTCAGCGTGCCAAGTTGGAGGCTGCAGTGGCCGAGGCCGAGCAGCAGGGCGAGGCGACCCTC
AGTGATGCCAAATGCAAGCTGGCAGATCTGGAGTGTGCCCTGCAGCAGGCCAAGCAGGACATGGCGCGGC
AGCTGTGCGAGTACCAGGAGCTGATGAATGCCAAGCTGGGCCTGGACATCGAGATCGCCACCTACAGGCG
CCTGCTGGAGGGCGAGGAGAGCCGGCTCTGTGAAGGTGTTGGACCAGTAAACATATCCGTCAGCAGCTCC
CGGGGCGGCCTGGTGTGCGGGCCTGAGCCTTTGGTTGCCGGCTCCACCCTCTCCCGCGGCGGGGTCACCT
TCTCAGGTAGCAGCAGCGTCTGTGCCACCAGTGGGGTCCTGGCTTCCTGTGGCCCCAGCCTGGGTGGAGC
CCGGGTCGCCCCGGCCACTGGGGACCTGCTGAGCACTGGCACAAGGAGTGGCTCCATGCTCATCAGCGAG
GCCTGTGTCCCCAGCGTCCCCTGCCCCCTGCCCACCCAGGGGGGCTTCAGCAGCTGCAGCGGCGGCCGCA
GCTCCAGCGTCCGCTTTGTGTCCACCACCACCTCCTGCCGGACCAAGTACTGA

Translation (600 aa):
MSCRSYRVSSGHRVGNFSSCSAMTPQNLNRFRANSVSCWSGPGFRGLGSFGSRSVITFGSYSPRIAAVGS
RPIHCGVRFGAGCGMGFGDGRGVGLGPRADSCVGLGFGAGSGIGYGFGGPGFGYRVGGVGVPAAPSITAV
TVNKSLLTPLNLEIDPNAQRVKKDEKEQIKTLNNKFASFIDKVRFLEQQNKLLETKWSFLQEQKCIRSNL
EPLFESYITNLRRQLEVLVSDQARLQAERNHLQDVLEGFKKKYEEEVVCRANAENEFVALKKDVDAAFMN
KSDLEANVDTLTQEIDFLKTLYMEEIQLLQSHISETSVIVKMDNSRDLNLDGIIAEVKAQYEEVARRSRA
DAEAWYQTKYEEMQVTAGQHCDNLRNIRNEINELTRLIQRLKAEIEHAKAQRAKLEAAVAEAEQQGEATL
SDAKCKLADLECALQQAKQDMARQLCEYQELMNAKLGLDIEIATYRRLLEGEESRLCEGVGPVNISVSSS
RGGLVCGPEPLVAGSTLSRGGVTFSGSSSVCATSGVLASCGPSLGGARVAPATGDLLSTGTRSGSMLISE
ACVPSVPCPLPTQGGFSSCSGGRSSSVRFVSTTTSCRTKY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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