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Report for CCDS88981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
88981.1 Public Mus musculus 16 B230307C23Rik 23 108 98 CCDS HistoryNCBI Gene:245305Re-query CCDS DB by CCDS ID:88981.1Re-query CCDS DB by GeneID:245305See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 88981.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000231936.1 ENSMUSP00000155950.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000231936.1Link to Ensembl Protein Viewer:ENSMUSP00000155950.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000231936Re-query CCDS DB by Protein ID:ENSMUSP00000155950
Original member Current member EBI ENSMUST00000231913.1 ENSMUSP00000156259.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000231913.1Link to Ensembl Protein Viewer:ENSMUSP00000156259.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000231913Re-query CCDS DB by Protein ID:ENSMUSP00000156259
Original member Current member EBI ENSMUST00000232387.1 ENSMUSP00000156366.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000232387.1Link to Ensembl Protein Viewer:ENSMUSP00000156366.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000232387Re-query CCDS DB by Protein ID:ENSMUSP00000156366
Original member NCBI NM_001362097.1 NP_001349026.1 Updated not alive Link to Nucleotide Sequence:NM_001362097.1Link to Protein Sequence:NP_001349026.1Re-query CCDS DB by Nucleotide ID:NM_001362097Re-query CCDS DB by Protein ID:NP_001349026
Current member NCBI NM_001362097.2 NP_001349026.1 Accepted alive Link to Nucleotide Sequence:NM_001362097.2Link to Protein Sequence:NP_001349026.1Re-query CCDS DB by Nucleotide ID:NM_001362097Re-query CCDS DB by Protein ID:NP_001349026Link to BLAST:NP_001349026.1

Chromosomal Locations for CCDS 88981.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 97997434 97997436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 98008629 98008755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 98008944 98009004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 98015666 98015693 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (219 nt):
ATGGATGTGTTGACCCATGATGATGTGCATGTGAACTTCACTCGAGAAGAATGGGCTTTGCTGAATCCTT
CACAAAAGAGCCTCTACAAAGATGTGATGCTGGAGACCTATAGGAACCTCAATGCTATAGGCTACAATTG
GGAAGACAATAATATTGAAGAACAGTGTCAAAGTTCCAGAAGAAATGGAAGGTGTGTTGGGGTATCCAGG
ACTGGCTGA

Translation (72 aa):
MDVLTHDDVHVNFTREEWALLNPSQKSLYKDVMLETYRNLNAIGYNWEDNNIEEQCQSSRRNGRCVGVSR
TG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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